RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 TRAF3IP2O43734 574 aaPredicted RBP13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 KHDRBS3O75525 346 aaKnown RBP13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 PMS2P2O95744 297 aa13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 KLK2P20151 261 aa13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 RAB3BP20337 219 aa13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 AZGP1P25311 298 aaKnown RBP13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 THBS2P35442 1172 aa13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 ROM1Q03395 351 aa13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 SF3B4Q15427 424 aaKnown RBP eCLIP13.8□□□□□ -0.25e-6■■■□□ 16.5
THUMPD3-210ENST00000515662 TMEM225Q6GV28 225 aa13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 JMJD6Q6NYC1 403 aaPredicted RBP13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 XKRXQ6PP77 449 aa13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 GPAT4Q86UL3 456 aa13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 OR8H2Q8N162 312 aa13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 OR2G2Q8NGZ5 317 aa13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 ADAMTS17Q8TE56 1095 aa13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 KCTD12Q96CX2 325 aaKnown RBP13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 OXGR1Q96P68 337 aa13.8□□□□□ -0.2
THUMPD3-210ENST00000515662 A0A1B0GTH9 108 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 LOC102725191A0A1B0GVB3 256 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 ZNF879B4DU55 563 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 STMND1H3BQB6 276 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 RAMP1O60894 148 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 LRP3O75074 770 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 CYB561P49447 251 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 SLC17A1Q14916 467 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 HSD17B12Q53GQ0 312 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 STPG1Q5TH74 334 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 LRRN1Q6UXK5 716 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 ZNF679Q8IYX0 411 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 ZNF454Q8N9F8 522 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 DEFB124Q8NES8 71 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 OR5AK2Q8NH90 309 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 SOSTQ9BQB4 213 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 MFRPQ9BY79 579 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 B3GNT4Q9C0J1 378 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 ELOVL3Q9HB03 270 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 NOX4Q9NPH5 578 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 RASD1Q9Y272 281 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 OR4C45A6NMZ5 311 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 PIN1P1O15428 100 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 EVX1P49640 407 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 EIF2B1Q14232 305 aaKnown RBP13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 SLC25A35Q3KQZ1 300 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 CEP78Q5JTW2 689 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 FDX2Q6P4F2 183 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 CNIH2Q6PI25 160 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 PRSS35Q8N3Z0 413 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 ABHD6Q9BV23 337 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 STMN3Q9NZ72 180 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 IL17BQ9UHF5 180 aa13.79□□□□□ -0.2
THUMPD3-210ENST00000515662 PRR33A8MZF0 331 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 SLC19A2O60779 497 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 PTTG1O95997 202 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 PGA4P0DJD7 388 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 PGA3P0DJD8 388 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 ZNF823P16415 610 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 H3F3AP84243 136 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 BAK1Q16611 211 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 PCK2Q16822 640 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 TEX30Q5JUR7 227 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 SYT9Q86SS6 491 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 KIAA1143Q96AT1 154 aaPredicted RBP13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 SLC25A44Q96H78 314 aaPredicted RBP13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 NEDD4LQ96PU5 975 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 DERL3Q96Q80 235 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 RBP7Q96R05 134 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 SMAD5Q99717 465 aaKnown RBP13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 PIGQQ9BRB3 760 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 ZCCHC4Q9H5U6 513 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 B3GAT2Q9NPZ5 323 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 TIGARQ9NQ88 270 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 KLHL9Q9P2J3 617 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 LRRC3CA6NJW4 275 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 ACOD1A6NK06 481 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 IGHG1P01857 330 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 SRD5A2P31213 254 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 MAGEB1P43366 347 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 B3GALT5-AS1P59052 145 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 RAC1P63000 192 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 OC90Q02509 493 aaPredicted RBP13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 TOMM20Q15388 145 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 THEM4Q5T1C6 240 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 KCTD18Q6PI47 426 aaPredicted RBP13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 GLB1L2Q8IW92 636 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 GDPD1Q8N9F7 314 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 OR52N5Q8NH56 324 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 OR6X1Q8NH79 312 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 C4orf45Q96LM5 186 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 DCBLD2Q96PD2 775 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 DEPPQ9NTK1 212 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 TBC1D24Q9ULP9 559 aa13.78□□□□□ -0.2
THUMPD3-210ENST00000515662 TMEM212A6NML5 194 aa13.77□□□□□ -0.21
THUMPD3-210ENST00000515662 NOTOA8MTQ0 251 aa13.77□□□□□ -0.21
THUMPD3-210ENST00000515662 TMCC2O75069 709 aa13.77□□□□□ -0.21
THUMPD3-210ENST00000515662 WNT11O96014 354 aa13.77□□□□□ -0.21
THUMPD3-210ENST00000515662 HRGP04196 525 aa13.77□□□□□ -0.21
THUMPD3-210ENST00000515662 SLC2A2P11168 524 aaPredicted RBP13.77□□□□□ -0.21
THUMPD3-210ENST00000515662 ZNF43P17038 809 aa13.77□□□□□ -0.21
THUMPD3-210ENST00000515662 SRMP19623 302 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms