RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 MDGA2Q7Z553 956 aa9.12□□□□□ -0.95
SNF8-214ENST00000515174 LSRQ86X29 649 aaPredicted RBP9.12□□□□□ -0.95
SNF8-214ENST00000515174 ZNF679Q8IYX0 411 aa9.12□□□□□ -0.95
SNF8-214ENST00000515174 SLC26A10Q8NG04 563 aa9.12□□□□□ -0.95
SNF8-214ENST00000515174 KIAA1143Q96AT1 154 aaPredicted RBP9.12□□□□□ -0.95
SNF8-214ENST00000515174 INTS12Q96CB8 462 aaKnown RBP9.12□□□□□ -0.95
SNF8-214ENST00000515174 SLC25A44Q96H78 314 aaPredicted RBP9.12□□□□□ -0.95
SNF8-214ENST00000515174 THOC3Q96J01 351 aaKnown RBP9.12□□□□□ -0.95
SNF8-214ENST00000515174 MAP6Q96JE9 813 aa9.12□□□□□ -0.95
SNF8-214ENST00000515174 C5orf34Q96MH7 638 aa9.12□□□□□ -0.95
SNF8-214ENST00000515174 OR5B2Q96R09 309 aa9.12□□□□□ -0.95
SNF8-214ENST00000515174 OR8B4Q96RC9 309 aa9.12□□□□□ -0.95
SNF8-214ENST00000515174 SOSTQ9BQB4 213 aa9.12□□□□□ -0.95
SNF8-214ENST00000515174 SLC30A2Q9BRI3 323 aa9.12□□□□□ -0.95
SNF8-214ENST00000515174 TTYH2Q9BSA4 534 aa9.12□□□□□ -0.95
SNF8-214ENST00000515174 CCDC32Q9BV29 185 aa9.12□□□□□ -0.95
SNF8-214ENST00000515174 SF3B5Q9BWJ5 86 aaKnown RBP9.12□□□□□ -0.95
SNF8-214ENST00000515174 MROQ9BYG7 248 aa9.12□□□□□ -0.95
SNF8-214ENST00000515174 RNF32Q9H0A6 362 aa9.12□□□□□ -0.95
SNF8-214ENST00000515174 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.12□□□□□ -0.95
SNF8-214ENST00000515174 ZFP64Q9NPA5 681 aa9.12□□□□□ -0.95
SNF8-214ENST00000515174 MRPL22Q9NWU5 206 aaKnown RBP9.12□□□□□ -0.95
SNF8-214ENST00000515174 MRM2Q9UI43 246 aaKnown RBP9.12□□□□□ -0.95
SNF8-214ENST00000515174 GNG8Q9UK08 70 aa9.12□□□□□ -0.95
SNF8-214ENST00000515174 SHISA8B8ZZ34 492 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 B8ZZF3 427 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 J3QRK9 145 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 TMCC2O75069 709 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 EDNRAP25101 427 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 CD96P40200 585 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 CASRP41180 1078 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 SUCLG1P53597 346 aaKnown RBP9.11□□□□□ -0.95
SNF8-214ENST00000515174 UCNP55089 124 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 RAC3P60763 192 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 PPP3R1P63098 170 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 POU3F1Q03052 451 aaPredicted RBP9.11□□□□□ -0.95
SNF8-214ENST00000515174 SLC3A1Q07837 685 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 RASGEF1BQ0VAM2 473 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 FOXO1Q12778 655 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 HNRNPA0Q13151 305 aaKnown RBP9.11□□□□□ -0.95
SNF8-214ENST00000515174 SRSF6Q13247 344 aaKnown RBP9.11□□□□□ -0.95
SNF8-214ENST00000515174 RIN1Q13671 783 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 LY6DQ14210 128 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 SLC17A1Q14916 467 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 TGIF1Q15583 401 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 HYAL4Q2M3T9 481 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 ZMAT1Q5H9K5 638 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 DDI2Q5TDH0 399 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 B3GNTL1Q67FW5 361 aaPredicted RBP9.11□□□□□ -0.95
SNF8-214ENST00000515174 TMEM225Q6GV28 225 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 ZNF544Q6NX49 715 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 SLC25A47Q6Q0C1 308 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 PCSK4Q6UW60 755 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 DPY19L4Q7Z388 723 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 FAM220AQ7Z4H9 259 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 CEACAM19Q7Z692 300 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 VASH2Q86V25 355 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 BEST3Q8N1M1 668 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 PARP16Q8N5Y8 322 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 SYT14Q8NB59 555 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 RNF128Q8TEB7 428 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 SMAP2Q8WU79 429 aaPredicted RBP9.11□□□□□ -0.95
SNF8-214ENST00000515174 TXNDC15Q96J42 360 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 CMTM3Q96MX0 182 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 DCLRE1CQ96SD1 692 aaKnown RBP9.11□□□□□ -0.95
SNF8-214ENST00000515174 FAM173AQ9BQD7 235 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 LRFN1Q9P244 771 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 DKKL1Q9UK85 242 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 BOKQ9UMX3 212 aaPredicted RBP9.11□□□□□ -0.95
SNF8-214ENST00000515174 CMAHPQ9Y471 501 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 CFAP46Q8IYW2 2715 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 KALRNO60229 2985 aa9.11□□□□□ -0.95
SNF8-214ENST00000515174 TENM4Q6N022 2769 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 TRBV5-5A0A0J9YX44 114 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 A0A1W2PNR3 127 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 SHISA3A0PJX4 238 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 TVP23AA6NH52 213 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 LRRC3CA6NJW4 275 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 CD8B2A6NJW9 211 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 TMEM212A6NML5 194 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 OR4C45A6NMZ5 311 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 FAM171A2A8MVW0 826 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 PRR32B1ATL7 298 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 ZNF879B4DU55 563 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 H7C1C5 153 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 MASP2O00187 686 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 LRRTM2O43300 516 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 SERPINI2O75830 405 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 UPK1BO75841 260 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 NEURL1O76050 574 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 PLGP00747 810 aaPredicted RBP9.1□□□□□ -0.95
SNF8-214ENST00000515174 IGHG1P01857 330 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 CLEC2LP0C7M8 214 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 PGA4P0DJD7 388 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 PGA3P0DJD8 388 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 CD8BP10966 210 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 LIPCP11150 499 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 ZNF43P17038 809 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 MYL9P24844 172 aa9.1□□□□□ -0.95
SNF8-214ENST00000515174 APEX1P27695 318 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms