RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 HCAR1Q9BXC0 346 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 HDHD5Q9BXW7 423 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 OPN3Q9H1Y3 402 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 Q9H521 79 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 MARCH7Q9H992 704 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 RPRD1BQ9NQG5 326 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 HAO2Q9NYQ3 351 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 TAS2R16Q9NYV7 291 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 GPR52Q9Y2T5 361 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 ICE1Q9Y2F5 2266 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 IGKV1D-43A0A0B4J1Z2 117 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 SLC22A31A6NKX4 558 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 FAM183AA6NL82 134 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 SNTNA6NMZ2 147 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 SLC16A7O60669 478 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 SMNDC1O75940 238 aaKnown RBP eCLIP10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 KRT33AO76009 404 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 GLCEO94923 617 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 ITGA5P08648 1049 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 GAAP10253 952 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 HOXB1P14653 301 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 LAP3P28838 519 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 HSF2Q03933 536 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 GLO1Q04760 184 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 FAPQ12884 760 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 GGTLC2Q14390 218 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 CEACAM16Q2WEN9 425 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 ANKRD16Q6P6B7 361 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 SSX8Q7RTT4 187 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 GLB1L2Q8IW92 636 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 CCDC36Q8IYA8 594 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 UBE2J2Q8N2K1 259 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 C17orf78Q8N4C9 275 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 ZNF433Q8N7K0 673 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 APH1BQ8WW43 257 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 ITLN2Q8WWU7 325 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 UBE2FQ969M7 185 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 NABP1Q96AH0 204 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 ZNF582Q96NG8 517 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 IL4I1Q96RQ9 567 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 MRPS18AQ9NVS2 196 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 TMEM38BQ9NVV0 291 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 WARS2Q9UGM6 360 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 KCNG2Q9UJ96 466 aa10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.53□□□□□ -0.72
PDLIM5-220ENST00000514830 M0R129 80 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 WBP4O75554 376 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 CLIC3O95833 236 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 IGHV1-2P23083 117 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 PAX7P23759 505 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 HTR1FP30939 366 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 CD79BP40259 229 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 CXCR4P61073 352 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 LSM6P62312 80 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 CSNK2BP67870 215 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 IL5RAQ01344 420 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 CDK5R2Q13319 367 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 PCK2Q16822 640 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 TEX30Q5JUR7 227 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 SFRP5Q5T4F7 317 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 FAM27BQ5VT28 67 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 OR7E24Q6IFN5 339 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 MEPCEQ7L2J0 689 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 DPPA2Q7Z7J5 298 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 P2RY8Q86VZ1 359 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 SLC26A10Q8NG04 563 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 OR1K1Q8NGR3 316 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 BCL2L2Q92843 193 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 KISS1RQ969F8 398 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 ZNF837Q96EG3 531 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 TSSK2Q96PF2 358 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 TEAD3Q99594 435 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 FOXB1Q99853 325 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 RBM24Q9BX46 236 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 NELFAQ9H3P2 528 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 SIAEQ9HAT2 523 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 SRA1Q9HD15 236 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 PLCXD1Q9NUJ7 323 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 CLN6Q9NWW5 311 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 RELNP78509 3460 aa10.52□□□□□ -0.73
PDLIM5-220ENST00000514830 ARPC4-TTLL3A0A0A6YYG9 625 aa10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 CCDC182A6NF36 153 aa10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 EEF1E1-BLOC1S5C9J1V9 151 aa10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 EEF1E1O43324 174 aaKnown RBP10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 ENTPD6O75354 484 aa10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 CLDN14O95500 239 aa10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 IGHV3-9P01782 118 aa10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 CLUP10909 449 aa10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 MSR1P21757 451 aa10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 FMO3P31513 532 aa10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 CDH11P55287 796 aa10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 FOXG1P55316 489 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 ARF1P84077 181 aaKnown RBP10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 SORDQ00796 357 aa10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 POU4F2Q12837 409 aa10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 APOFQ13790 326 aa10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 ETFDHQ16134 617 aa10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 GABRA6Q16445 453 aa10.51□□□□□ -0.73
PDLIM5-220ENST00000514830 LCN1P1Q5VSP4 162 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms