RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	RWDD2A	Q9UIY3	292 aa		2.56	□□□□□ -2
CALCOCO2-223	ENST00000514267	KLHL21	Q9UJP4	597 aa		2.56	□□□□□ -2
CALCOCO2-223	ENST00000514267	PITPNC1	Q9UKF7	332 aa		2.56	□□□□□ -2
CALCOCO2-223	ENST00000514267	UBQLN1	Q9UMX0	589 aa	Known RBP	2.56	□□□□□ -2
CALCOCO2-223	ENST00000514267	CHTOP	Q9Y3Y2	248 aa	Known RBP	2.56	□□□□□ -2
CALCOCO2-223	ENST00000514267		V9GY05	133 aa		2.56	□□□□□ -2
CALCOCO2-223	ENST00000514267	LTBP4	Q8N2S1	1624 aa		2.56	□□□□□ -2
CALCOCO2-223	ENST00000514267	RREB1	Q92766	1687 aa		2.56	□□□□□ -2
CALCOCO2-223	ENST00000514267		A0A1B0GUL6	1792 aa		2.56	□□□□□ -2
CALCOCO2-223	ENST00000514267	CASZ1	Q86V15	1759 aa		2.56	□□□□□ -2
CALCOCO2-223	ENST00000514267	BTAF1	O14981	1849 aa		2.56	□□□□□ -2
CALCOCO2-223	ENST00000514267	ECM29	Q5VYK3	1845 aa		2.56	□□□□□ -2
CALCOCO2-223	ENST00000514267	MYH6	P13533	1939 aa		2.56	□□□□□ -2
CALCOCO2-223	ENST00000514267	BAZ2A	Q9UIF9	1905 aa	Known RBP	2.56	□□□□□ -2
CALCOCO2-223	ENST00000514267	IGHV3OR16-13	A0A075B7E8	117 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267		A0A0G2JRQ6	117 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267		A0A1B0GTQ1	180 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	TUBAL3	A6NHL2	446 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267		K7N7A8	449 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	DLGAP1	O14490	977 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	LSM1	O15116	133 aa	Known RBP	2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	STX10	O60499	249 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	SRSF10	O75494	262 aa	Known RBP	2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	ERLIN2	O94905	339 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	SNAPIN	O95295	136 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	IGHV3-48	P01763	117 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	OR8U8	P0C7N1	319 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	OR8G3P	P0DMU2	310 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	CCNB1	P14635	433 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	ABO	P16442	354 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	CAPN2	P17655	700 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	AZU1	P20160	251 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	FAS	P25445	335 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	AQP1	P29972	269 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	PPP1R2	P41236	205 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	GLP1R	P43220	463 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	MAGEA1	P43355	309 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	P2RY4	P51582	365 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	RIPPLY3	P57055	190 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	SCN7A	Q01118	1682 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	BCL2L1	Q07817	233 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	TCP10	Q12799	353 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	SYCP1	Q15431	976 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	SPA17	Q15506	151 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	IL17A	Q16552	155 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	EOGT	Q5NDL2	527 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	MARCH8	Q5T0T0	291 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	C9orf135	Q5VTT2	229 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	KRTAP5-1	Q6L8H4	278 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	MAST2	Q6P0Q8	1798 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	NHS	Q6T4R5	1651 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	PHLPP2	Q6ZVD8	1323 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	MICU2	Q8IYU8	434 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	GABRG1	Q8N1C3	465 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	CSGALNACT2	Q8N6G5	542 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	ZNF525	Q8N782	197 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	NAV1	Q8NEY1	1877 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	OR51S1	Q8NGJ8	323 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	OR52K1	Q8NGK4	314 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	OR1E3	Q8WZA6	343 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	SLC25A38	Q96DW6	304 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	VSIG2	Q96IQ7	327 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	PANX1	Q96RD7	426 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	SPZ1	Q9BXG8	430 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	C20orf85	Q9H1P6	137 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	GBA3	Q9H227	469 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	EHD1	Q9H4M9	534 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	ZDHHC11	Q9H8X9	412 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	PSTPIP2	Q9H939	334 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	ANKRA2	Q9H9E1	313 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	MRPS30	Q9NP92	439 aa	Known RBP	2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	IL26	Q9NPH9	171 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	INPP5E	Q9NRR6	644 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	C20orf96	Q9NUD7	363 aa	Predicted RBP	2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	GPATCH2L	Q9NWQ4	482 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	LYAR	Q9NX58	379 aa	Known RBP	2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	BTNL2	Q9UIR0	455 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	MYH2	Q9UKX2	1941 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	VANGL2	Q9ULK5	521 aa		2.55	□□□□□ -2
CALCOCO2-223	ENST00000514267	CACNA1S	Q13698	1873 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	LAMB1	P07942	1786 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	COL4A1	P02462	1669 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	ROBO3	Q96MS0	1386 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	IGKV1D-8	A0A087WSZ0	117 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	CCL21	O00585	134 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	NDUFAB1	O14561	156 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	ZBTB5	O15062	677 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	BCL2L11	O43521	198 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	CYTH3	O43739	400 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	DNAJB6	O75190	326 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	OR2J3	O76001	311 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	TDP2	O95551	362 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	IGHV3-23	P01764	117 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	IGHV2-5	P01817	119 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	ERCC1	P07992	297 aa	Predicted RBP	2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	RBMY1C	P0DJD4	496 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	CCNE1	P24864	410 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	NAMPT	P43490	491 aa		2.54	□□□□□ -2
CALCOCO2-223	ENST00000514267	RFX3	P48380	749 aa		2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms