RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SPOCK1Q08629 439 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 COX10Q12887 443 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 PPA1Q15181 289 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 C10orf128Q5T292 105 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 SLC27A4Q6P1M0 643 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 ANKRD16Q6P6B7 361 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 UGT2A3Q6UWM9 527 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 LYPD4Q6UWN0 246 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 ADCK1Q86TW2 530 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 MYPOPQ86VE0 399 aaPredicted RBP8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 C10orf67Q8IYJ2 551 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 LNX2Q8N448 690 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 LRRC18Q8N456 261 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 C1orf162Q8NEQ5 155 aaPredicted RBP8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 OR51L1Q8NGJ5 315 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 ZNRF4Q8WWF5 429 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 NABP1Q96AH0 204 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 EME1Q96AY2 570 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 OTULINQ96BN8 352 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 MUS81Q96NY9 551 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 SH3GL3Q99963 347 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 RBM4BQ9BQ04 359 aaKnown RBP8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 RBM4Q9BWF3 364 aaKnown RBP8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 NUAK2Q9H093 628 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 EMC7Q9NPA0 242 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 ZNF224Q9NZL3 707 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 VSX1Q9NZR4 365 aaPredicted RBP8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 NDRG3Q9UGV2 375 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 COA3Q9Y2R0 106 aaPredicted RBP8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 SLC25A15Q9Y619 301 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 PKDREJQ9NTG1 2253 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 IGLV1-36A0A0B4J1U3 117 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 DEFB108AA8MXU0 73 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 CENPBD1B2RD01 187 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 M0R1B8 84 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 RENP00797 406 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 EPXP11678 715 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 CD79AP11912 226 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 PRF1P14222 555 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 ZNF84P51523 738 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 ALDH3A2P51648 485 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 ZNF133P52736 654 aaPredicted RBP8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 SH3BGRP55822 239 aaPredicted RBP8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 UBE2NP61088 152 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 CDK5Q00535 292 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 TGFBR3Q03167 851 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 NPRL3Q12980 569 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 PTGES3Q15185 160 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 SGCAQ16586 387 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 MEP1BQ16820 701 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 TIMM23BQ5SRD1 257 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 ZNF362Q5T0B9 420 aaPredicted RBP8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 MDP1Q86V88 176 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 SKA3Q8IX90 412 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 ZNF295-AS1Q8N0V1 137 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 OR6V1Q8N148 313 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 PARP8Q8N3A8 854 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 GALNT4Q8N4A0 578 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 SLC22A24Q8N4F4 322 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 NPEPL1Q8NDH3 523 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 FAM222BQ8WU58 562 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 DNAJC9Q8WXX5 260 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 PIK3IP1Q96FE7 263 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 DACH2Q96NX9 599 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 RBP7Q96R05 134 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 MBOAT4Q96T53 435 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 C9orf16Q9BUW7 83 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 HCAR1Q9BXC0 346 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 HDHD5Q9BXW7 423 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 GABARAPL3Q9BY60 117 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 SLC25A19Q9HC21 320 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 TVP23BQ9NYZ1 205 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 USE1Q9NZ43 259 aa8.56□□□□□ -1.04
TOPBP1-209ENST00000513818 A0A1W2PPR1 153 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 TVP23AA6NH52 213 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 RIIAD1A6NNX1 92 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 ZAR1LA6NP61 321 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 CASKO14936 926 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 SURF4O15260 269 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 RRP9O43818 475 aaKnown RBP8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 PRKYO43930 277 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 KHDRBS3O75525 346 aaKnown RBP8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 SNAP29O95721 258 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 IFNGP01579 166 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 GAAP10253 952 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 PSKH1P11801 424 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 PPP3CBP16298 524 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 ZNF3P17036 446 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 CRYGSP22914 178 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 LOXP28300 417 aaPredicted RBP8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 LAP3P28838 519 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 RPS27P42677 84 aaKnown RBP8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 GIPRP48546 466 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 PTDSS1P48651 473 aaKnown RBP8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 PCYT1AP49585 367 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 IDH3GP51553 393 aaPredicted RBP8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 TLE4Q04727 773 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 THEM4Q5T1C6 240 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 FBXW10Q5XX13 1052 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms