RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 ZNF75AQ96N20 296 aa13.79□□□□□ -0.2
DDX41-214ENST00000512334 GPX7Q96SL4 187 aaPredicted RBP13.79□□□□□ -0.2
DDX41-214ENST00000512334 TMUB1Q9BVT8 246 aa13.79□□□□□ -0.2
DDX41-214ENST00000512334 GRIP2Q9C0E4 1043 aa13.79□□□□□ -0.2
DDX41-214ENST00000512334 OR52D1Q9H346 318 aa13.79□□□□□ -0.2
DDX41-214ENST00000512334 REEP1Q9H902 201 aa13.79□□□□□ -0.2
DDX41-214ENST00000512334 SIAEQ9HAT2 523 aa13.79□□□□□ -0.2
DDX41-214ENST00000512334 CCNB1IP1Q9NPC3 277 aa13.79□□□□□ -0.2
DDX41-214ENST00000512334 NRIP3Q9NQ35 241 aa13.79□□□□□ -0.2
DDX41-214ENST00000512334 UGT2A1Q9Y4X1 527 aa13.79□□□□□ -0.2
DDX41-214ENST00000512334 MED13LQ71F56 2210 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 DHRS12A0PJE2 317 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 PRSS37A4D1T9 235 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 AQP12BA6NM10 295 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 SOCS2O14508 198 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 CCNB2O95067 398 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 PPP1R3DO95685 299 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 SERPINA5P05154 406 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 BMP4P12644 408 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 SLC6A6P31641 620 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 GALK2Q01415 458 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 HSF2Q03933 536 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 HGFACQ04756 655 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 PLP2Q04941 152 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 SNTB2Q13425 540 aaKnown RBP13.78□□□□□ -0.2
DDX41-214ENST00000512334 OR2T5Q6IEZ7 315 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 C11orf71Q6IPW1 123 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 C1orf94Q6P1W5 598 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 PGBD2Q6P3X8 592 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 AQP12AQ8IXF9 295 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 LINC00471Q8N535 108 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 OR9Q2Q8NGE9 314 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 OR2T29Q8NH02 315 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 ERMAPQ96PL5 475 aaPredicted RBP13.78□□□□□ -0.2
DDX41-214ENST00000512334 CHID1Q9BWS9 393 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 RERGLQ9H628 205 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 GDF2Q9UK05 429 aaPredicted RBP13.78□□□□□ -0.2
DDX41-214ENST00000512334 SAMHD1Q9Y3Z3 626 aaKnown RBP13.78□□□□□ -0.2
DDX41-214ENST00000512334 U3KQV3 271 aa13.78□□□□□ -0.2
DDX41-214ENST00000512334 SLC22A23A1A5C7 686 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 VSTM5A8MXK1 200 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 MGRN1O60291 552 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 NDUFS7O75251 213 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 OR4A8P0C604 315 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 THBS4P35443 961 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 SERPINF1P36955 418 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 GSSP48637 474 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 RASSF2P50749 326 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 HMGA2P52926 109 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 SNRPD2P62316 118 aaKnown RBP13.77□□□□□ -0.21
DDX41-214ENST00000512334 TSPAN31Q12999 210 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 ITPR3Q14573 2671 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 RFX4Q33E94 735 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 PGM2L1Q6PCE3 622 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 ZNF584Q8IVC4 421 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 ADGRG5Q8IZF4 528 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 OR4C15Q8NGM1 316 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 CANT1Q8WVQ1 401 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 NABP1Q96AH0 204 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 SAMD8Q96LT4 415 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 IFT27Q9BW83 186 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 SPEF1Q9Y4P9 236 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 PMF1-BGLAPU3KQ54 211 aa13.77□□□□□ -0.21
DDX41-214ENST00000512334 IQCMA0A1B0GVH7 501 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 GSC2O15499 205 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 AHCYL1O43865 530 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 CST1P01037 141 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 PTHP01270 115 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 IGHV4-39P01824 125 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 ZNF35P13682 527 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 LAP3P28838 519 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 NOS3P29474 1203 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 ERFP50548 548 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 RAB35Q15286 201 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 ADIPOQQ15848 244 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 ETFDHQ16134 617 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 FAM27BQ5VT28 67 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 ZNF620Q6ZNG0 422 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 PTCHD4Q6ZW05 846 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 ADCK1Q86TW2 530 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 JAZF1Q86VZ6 243 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 AQP11Q8NBQ7 271 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 SLC30A7Q8NEW0 376 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 FOXN4Q96NZ1 517 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 CADM1Q9BY67 442 aaKnown RBP13.76□□□□□ -0.21
DDX41-214ENST00000512334 SYT4Q9H2B2 425 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 ZNF442Q9H7R0 627 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 CDH20Q9HBT6 801 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 BARX1Q9HBU1 254 aaPredicted RBP13.76□□□□□ -0.21
DDX41-214ENST00000512334 VNN3Q9NY84 501 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 POMPQ9Y244 141 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 HIVEP1P15822 2718 aa13.76□□□□□ -0.21
DDX41-214ENST00000512334 TRIM64A6NGJ6 449 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 TRIM64BA6NI03 449 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 GNGT2O14610 69 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 SLC16A7O60669 478 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 ATP5HO75947 161 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 TXNDC12O95881 172 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 GASTP01350 101 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 MMP7P09237 267 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms