RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 ZBTB49Q6ZSB9 765 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 SLC22A24Q8N4F4 322 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 NPEPL1Q8NDH3 523 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 FNDC8Q8TC99 324 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 HSD17B8Q92506 261 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 PIK3IP1Q96FE7 263 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 PLEKHA8Q96JA3 519 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 SLC29A1Q99808 456 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 NUAK2Q9H093 628 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 MED20Q9H944 212 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 NOX3Q9HBY0 568 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 SLC25A19Q9HC21 320 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 EMC7Q9NPA0 242 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 CMC2Q9NRP2 79 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 USE1Q9NZ43 259 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 NPAP1Q9NZP6 1156 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 NKX1-2Q9UD57 310 aaPredicted RBP9.1□□□□□ -0.95
NR1I3-227ENST00000510951 KCNN3Q9UGI6 736 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 KLHL21Q9UJP4 597 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 COA3Q9Y2R0 106 aaPredicted RBP9.1□□□□□ -0.95
NR1I3-227ENST00000510951 AMDHD2Q9Y303 409 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 SLC25A15Q9Y619 301 aa9.1□□□□□ -0.95
NR1I3-227ENST00000510951 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-227ENST00000510951 A6NNC1 897 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 ZAR1LA6NP61 321 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 SURF4O15260 269 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 AHCYL1O43865 530 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 KHDRBS3O75525 346 aaKnown RBP9.09□□□□□ -0.95
NR1I3-227ENST00000510951 MPZL1O95297 269 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 FARS2O95363 451 aaKnown RBP9.09□□□□□ -0.95
NR1I3-227ENST00000510951 WNT11O96014 354 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 PATE4P0C8F1 98 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 OR8G3PP0DMU2 310 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 CLUP10909 449 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 CRYGSP22914 178 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 GIPRP48546 466 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 PIGFQ07326 219 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 SPOCK1Q08629 439 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 PTGES3Q15185 160 aaKnown RBP9.09□□□□□ -0.95
NR1I3-227ENST00000510951 ZNF362Q5T0B9 420 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-227ENST00000510951 DNM1P34Q6PK57 102 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 MDP1Q86V88 176 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 P2RY8Q86VZ1 359 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 SKA3Q8IX90 412 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 OR6V1Q8N148 313 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 GALNT4Q8N4A0 578 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 PROKR2Q8NFJ6 384 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 OR51L1Q8NGJ5 315 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 FGFBP3Q8TAT2 258 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 NANOS1Q8WY41 292 aaKnown RBP9.09□□□□□ -0.95
NR1I3-227ENST00000510951 NABP1Q96AH0 204 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 SNX18Q96RF0 628 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 USB1Q9BQ65 265 aaKnown RBP9.09□□□□□ -0.95
NR1I3-227ENST00000510951 GABARAPL3Q9BY60 117 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 DCLRE1BQ9H816 532 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 SLC24A3Q9HC58 644 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 SRA1Q9HD15 236 aaKnown RBP9.09□□□□□ -0.95
NR1I3-227ENST00000510951 TVP23BQ9NYZ1 205 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 ZNF224Q9NZL3 707 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 ENOPH1Q9UHY7 261 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 CRYBG3Q68DQ2 2970 aa9.09□□□□□ -0.95
NR1I3-227ENST00000510951 RTTNQ86VV8 2226 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 ROS1P08922 2347 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 ARPC4-TTLL3A0A0A6YYG9 625 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 IGLV1-36A0A0B4J1U3 117 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 DEFB108AA8MXU0 73 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 PRKYO43930 277 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 UBL3O95164 117 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 SNAP29O95721 258 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 HLA-DQA2P01906 255 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 HMGN1P05114 100 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 SCG5P05408 212 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 CELA3BP08861 270 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 MSR1P21757 451 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 PAICSP22234 425 aaKnown RBP9.08□□□□□ -0.96
NR1I3-227ENST00000510951 LAP3P28838 519 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 CRABP1P29762 137 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 PTDSS1P48651 473 aaKnown RBP9.08□□□□□ -0.96
NR1I3-227ENST00000510951 IDH3GP51553 393 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-227ENST00000510951 RAD23AP54725 363 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 MRPS34P82930 218 aaKnown RBP9.08□□□□□ -0.96
NR1I3-227ENST00000510951 SNAPC1Q16533 368 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 MEP1BQ16820 701 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 GSG1Q2KHT4 349 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 SLX4IPQ5VYV7 408 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 PLBD1Q6P4A8 553 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 UGT2A3Q6UWM9 527 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 LYPD4Q6UWN0 246 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 FOXL2NBQ6ZUU3 175 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 ZNF627Q7L945 461 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 SLC16A14Q7RTX9 510 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 MYPOPQ86VE0 399 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-227ENST00000510951 TMEM200AQ86VY9 491 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 GLB1L2Q8IW92 636 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 ZNF295-AS1Q8N0V1 137 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 OR6K6Q8NGW6 343 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 OR2T4Q8NH00 348 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 ZNRF4Q8WWF5 429 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 PLPPR2Q96GM1 343 aa9.08□□□□□ -0.96
NR1I3-227ENST00000510951 SLC38A2Q96QD8 506 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms