RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 SAR1AQ9NR31 198 aa11.66□□□□□ -0.54
CCHCR1-227ENST00000508852 CYSLTR2Q9NS75 346 aa11.66□□□□□ -0.54
CCHCR1-227ENST00000508852 HIF3AQ9Y2N7 669 aa11.66□□□□□ -0.54
CCHCR1-227ENST00000508852 ELOVL7A1L3X0 281 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 A6NIZ1 184 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 FXYD1O00168 92 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 PPIHO43447 177 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 HPXP02790 462 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 PATE4P0C8F1 98 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 TUBG1P23258 451 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 STOMP27105 288 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 GCH1P30793 250 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 AQP2P41181 271 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 SLC9A3P48764 834 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 CRYBA2P53672 197 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 RAP1BP61224 184 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 RAP1AP62834 184 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 ZNF718Q3SXZ3 478 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 CYBRD1Q53TN4 286 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 ZMAT1Q5H9K5 638 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 ARMC4Q5T2S8 1044 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 FAM27BQ5VT28 67 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 SYT9Q86SS6 491 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 TSPYL5Q86VY4 417 aaPredicted RBP11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 NKAIN4Q8IVV8 208 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 OR51F2Q8NH61 342 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 PFN4Q8NHR9 129 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 RAB39BQ96DA2 213 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 BPIFA2Q96DR5 249 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 RACGAP1Q9H0H5 632 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 TUBG2Q9NRH3 451 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 ZNF275Q9NSD4 429 aaPredicted RBP11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 DECR2Q9NUI1 292 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 METRNQ9UJH8 293 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 CAPN7Q9Y6W3 813 aa11.65□□□□□ -0.54
CCHCR1-227ENST00000508852 SVEP1Q4LDE5 3571 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 TRAV20A0A0B4J274 112 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 PLSCR5A0PG75 271 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 AHCYL1O43865 530 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 IGHV3-13P01766 116 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 IGHMP01871 453 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 IFNW1P05000 195 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 MMP7P09237 267 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 FAM157BP0CG42 384 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 NAT2P11245 290 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 TCN1P20061 433 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 COL8A2P25067 703 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 CRYBB2P43320 205 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 GDI2P50395 445 aaKnown RBP11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 ARHGDIAP52565 204 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 SEC24CP53992 1094 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 RPL27P61353 136 aaKnown RBP11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 MYBPC1Q00872 1141 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 SLC3A1Q07837 685 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 CD47Q08722 323 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 MAD2L1BPQ15013 274 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 TRAM2Q15035 370 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 TRIP10Q15642 601 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 MSMPQ1L6U9 139 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 KRTAP24-1Q3LI83 254 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 LRRC23Q53EV4 343 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 ZER1Q7Z7L7 766 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 LRP11Q86VZ4 500 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 MICU2Q8IYU8 434 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 LRRC18Q8N456 261 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 OR1J1Q8NGS3 322 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 RP9Q8TA86 221 aaKnown RBP11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 FGFBP3Q8TAT2 258 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 TMEM186Q96B77 213 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 ELMOD3Q96FG2 381 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 TIMD4Q96H15 378 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 TPD52L3Q96J77 140 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 DIRC2Q96SL1 478 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 HOPXQ9BPY8 73 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 SOX7Q9BT81 388 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 FNDC11Q9BVV2 318 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 C19orf24Q9BVV8 132 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 EGLN1Q9GZT9 426 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 ELOVL3Q9HB03 270 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 FZR1Q9UM11 496 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 TIMM10BQ9Y5J6 103 aa11.64□□□□□ -0.55
CCHCR1-227ENST00000508852 IGHV1-69-2A0A0G2JMI3 117 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 LOC100653049A0A140TA62 436 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 LYNX1G3V0Z9 82 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 TPD52L2O43399 206 aaKnown RBP11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 KRT34O76011 436 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 MSMBP08118 114 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 CST2P09228 141 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 LYNX1P0DP58 116 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 IFI30P13284 250 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 IL2RGP31785 369 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 OR1E2P47887 323 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 RUNX1T1Q06455 604 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 CCNIQ14094 377 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 SGCAQ16586 387 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 HFEQ30201 348 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 PABPC1L2AQ5JQF8 200 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 SHQ1Q6PI26 577 aaKnown RBP11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 IL17RELQ6ZVW7 336 aa11.63□□□□□ -0.55
CCHCR1-227ENST00000508852 RRM2BQ7LG56 351 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms