RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 IFI44LQ53G44 452 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 FAM166AQ6J272 317 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 RGS7BPQ6MZT1 257 aaPredicted RBP12.25□□□□□ -0.45
RAB28-205ENST00000508274 PODNL1Q6PEZ8 512 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 TBPL2Q6SJ96 375 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 LRRC75AQ8NAA5 344 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 ZNF540Q8NDQ6 660 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 CPEB3Q8NE35 698 aaKnown RBP12.25□□□□□ -0.45
RAB28-205ENST00000508274 OR13C2Q8NGS9 318 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 OR51A7Q8NH64 312 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 SNX18Q96RF0 628 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 ELAC2Q9BQ52 826 aaKnown RBP12.25□□□□□ -0.45
RAB28-205ENST00000508274 BEX2Q9BXY8 128 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 CDH20Q9HBT6 801 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 ZNF346Q9UL40 294 aaKnown RBP12.25□□□□□ -0.45
RAB28-205ENST00000508274 AP3M1Q9Y2T2 418 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 NCR1O76036 304 aa12.24□□□□□ -0.45
RAB28-205ENST00000508274 IGHMP01871 453 aa12.24□□□□□ -0.45
RAB28-205ENST00000508274 TACSTD2P09758 323 aa12.24□□□□□ -0.45
RAB28-205ENST00000508274 IFNA8P32881 189 aa12.24□□□□□ -0.45
RAB28-205ENST00000508274 CTXN1P60606 82 aa12.24□□□□□ -0.45
RAB28-205ENST00000508274 RPL27P61353 136 aaKnown RBP12.24□□□□□ -0.45
RAB28-205ENST00000508274 MRPS34P82930 218 aaKnown RBP12.24□□□□□ -0.45
RAB28-205ENST00000508274 TRAM2Q15035 370 aa12.24□□□□□ -0.45
RAB28-205ENST00000508274 TBC1D28Q2M2D7 210 aa12.24□□□□□ -0.45
RAB28-205ENST00000508274 PABPC1L2AQ5JQF8 200 aa12.24□□□□□ -0.45
RAB28-205ENST00000508274 SLC25A47Q6Q0C1 308 aa12.24□□□□□ -0.45
RAB28-205ENST00000508274 FKBP9P1Q75LS8 142 aa12.24□□□□□ -0.45
RAB28-205ENST00000508274 TSEN54Q7Z6J9 526 aaKnown RBP12.24□□□□□ -0.45
RAB28-205ENST00000508274 HOPXQ9BPY8 73 aaPredicted RBP12.24□□□□□ -0.45
RAB28-205ENST00000508274 EFCAB1Q9HAE3 211 aa12.24□□□□□ -0.45
RAB28-205ENST00000508274 SIAEQ9HAT2 523 aa12.24□□□□□ -0.45
RAB28-205ENST00000508274 STX18Q9P2W9 335 aaKnown RBP12.24□□□□□ -0.45
RAB28-205ENST00000508274 KCNS2Q9ULS6 477 aa12.24□□□□□ -0.45
RAB28-205ENST00000508274 A0A087WUU8 490 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 IQCMA0A1B0GVH7 501 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 H7C1C5 153 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 CDC42EP2O14613 210 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 MGRN1O60291 552 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 SNAP29O95721 258 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 TGFAP01135 160 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 IFNA2P01563 188 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 LCKP06239 509 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 ZNF26P17031 533 aaPredicted RBP12.23□□□□□ -0.45
RAB28-205ENST00000508274 ZNF32P17041 273 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 COL8A2P25067 703 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 GPR4P46093 362 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 LCN6P62502 163 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 ERVK-25P63136 954 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 HSF2Q03933 536 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 PRKCDQ05655 676 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 SGCAQ16586 387 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 HACD2Q6Y1H2 254 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 DPPA2Q7Z7J5 298 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 OAFQ86UD1 273 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 ICA1LQ8NDH6 482 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 AKR7LQ8NHP1 331 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 ZNF519Q8TB69 540 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 ACOT11Q8WXI4 607 aaPredicted RBP12.23□□□□□ -0.45
RAB28-205ENST00000508274 FAM162AQ96A26 154 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 KCTD14Q9BQ13 255 aaPredicted RBP12.23□□□□□ -0.45
RAB28-205ENST00000508274 FAM107BQ9H098 131 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 SHARPINQ9H0F6 387 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 MYLK2Q9H1R3 596 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 MS4A5Q9H3V2 200 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 C1orf198Q9H425 327 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 SMURF2Q9HAU4 748 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 ABCD2Q9UBJ2 740 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 EGFL7Q9UHF1 273 aa12.23□□□□□ -0.45
RAB28-205ENST00000508274 EFCAB9A8MZ26 197 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 CCNOP22674 350 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 MAGEB1P43366 347 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 CHN2P52757 468 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 UCP2P55851 309 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 PLP2Q04941 152 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 CCNIQ14094 377 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 TAF11Q15544 211 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 FAM120AOSQ5T036 256 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 ZNF730Q6ZMV8 503 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 GTF3AQ92664 365 aaKnown RBP12.22□□□□□ -0.45
RAB28-205ENST00000508274 YIPF5Q969M3 257 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 ALG12Q9BV10 488 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 CCNB1IP1Q9NPC3 277 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 TAAR3PQ9P1P4 343 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 ADAM18Q9Y3Q7 739 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 IGLV3-9A0A075B6K5 115 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 LOC100509620A0A075B734 347 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 SLC22A23A1A5C7 686 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 PTHP01270 115 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 ZNF250P15622 560 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 APLNRP35414 380 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 KLF3P57682 345 aaPredicted RBP12.22□□□□□ -0.45
RAB28-205ENST00000508274 PSME3P61289 254 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 PSG4Q00888 419 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 GLO1Q04760 184 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 NKPD1Q17RQ9 610 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 TMEM255AQ5JRV8 349 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 MBOAT2Q6ZWT7 520 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 ZNF101Q8IZC7 436 aa12.22□□□□□ -0.45
RAB28-205ENST00000508274 RNF148Q8N7C7 305 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms