RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 EID2Q8N6I1 236 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 NFAM1Q8NET5 270 aaPredicted RBP13.04□□□□□ -0.32
DDX41-208ENST00000507955 DLL4Q9NR61 685 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 CAMK2AQ9UQM7 478 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 COA3Q9Y2R0 106 aaPredicted RBP13.04□□□□□ -0.32
DDX41-208ENST00000507955 RTTNQ86VV8 2226 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 MEIKINA0A087WXM9 373 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 IGKV1D-43A0A0B4J1Z2 117 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 A8MVM7 634 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 AIPO00170 330 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 PLPP3O14495 311 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 EPHA8P29322 1005 aaPredicted RBP13.04□□□□□ -0.32
DDX41-208ENST00000507955 SELENOPP49908 381 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 SNTB2Q13425 540 aaKnown RBP13.04□□□□□ -0.32
DDX41-208ENST00000507955 HLA-BQ31612 363 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 GRINAQ7Z429 371 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 TMPRSS12Q86WS5 348 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 OR8H3Q8N146 312 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 OTOSQ8NHW6 89 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 SYNPRQ8TBG9 265 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 SMIM4Q8WVI0 70 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 EMC6Q9BV81 110 aa13.04□□□□□ -0.32
DDX41-208ENST00000507955 RALGAPA1Q6GYQ0 2036 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 ZSCAN5BA6NJL1 495 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 ALOX12BO75342 701 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 ADAM8P78325 824 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 MFGE8Q08431 387 aaPredicted RBP13.03□□□□□ -0.32
DDX41-208ENST00000507955 SNTA1Q13424 505 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 EMC4Q5J8M3 183 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 GPR139Q6DWJ6 353 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 GLB1L2Q8IW92 636 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 OR11G2Q8NGC1 345 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 OR52I2Q8NH67 350 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 ZNF519Q8TB69 540 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 HGDQ93099 445 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 DACT3Q96B18 629 aaPredicted RBP13.03□□□□□ -0.32
DDX41-208ENST00000507955 CCDC74BQ96LY2 380 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 SORCS2Q96PQ0 1159 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 WDR77Q9BQA1 342 aaPredicted RBP13.03□□□□□ -0.32
DDX41-208ENST00000507955 MRPL39Q9NYK5 338 aaKnown RBP13.03□□□□□ -0.32
DDX41-208ENST00000507955 ASPMQ8IZT6 3477 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 MASP2O00187 686 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 GSTZ1O43708 216 aaPredicted RBP13.03□□□□□ -0.32
DDX41-208ENST00000507955 DXOO77932 396 aaKnown RBP13.03□□□□□ -0.32
DDX41-208ENST00000507955 POU4F3Q15319 338 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 UBE2NLQ5JXB2 153 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 PHF19Q5T6S3 580 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 Q6ZTK2 550 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 LINC00346Q8IVM7 164 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 CCDC28AQ8IWP9 274 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 MRPL48Q96GC5 212 aaKnown RBP13.03□□□□□ -0.32
DDX41-208ENST00000507955 GAL3ST1Q99999 423 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 DPCDQ9BVM2 203 aaPredicted RBP13.03□□□□□ -0.32
DDX41-208ENST00000507955 C20orf85Q9H1P6 137 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 FBXL3Q9UKT7 428 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 RCE1Q9Y256 329 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 CPAMD8Q8IZJ3 1885 aa13.03□□□□□ -0.32
DDX41-208ENST00000507955 COL5A1P20908 1838 aaPredicted RBP13.02□□□□□ -0.32
DDX41-208ENST00000507955 TEX51A0A1B0GUA7 166 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 SLC22A23A1A5C7 686 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 MS4A18H0YCH9 400 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 EFNA2O43921 213 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 OR2J2O76002 312 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 TOXO94900 526 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 AHSA1O95433 338 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 CFDP00746 253 aaPredicted RBP13.02□□□□□ -0.32
DDX41-208ENST00000507955 CFIP05156 583 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 CELA2AP08217 269 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 IFNGR1P15260 489 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 CCKBRP32239 447 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 PITPNAQ00169 270 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 MS4A18Q3C1V0 323 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 CORO6Q6QEF8 472 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 LRRTM1Q86UE6 522 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 KMT5CQ86Y97 462 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 CARFQ8N187 725 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 PIAS4Q8N2W9 510 aaPredicted RBP13.02□□□□□ -0.32
DDX41-208ENST00000507955 SUN5Q8TC36 379 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 SAP25Q8TEE9 199 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 TXNIPQ9H3M7 391 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 C12orf10Q9HB07 376 aa13.02□□□□□ -0.32
DDX41-208ENST00000507955 EML6Q6ZMW3 1958 aa13.02□□□□□ -0.33
DDX41-208ENST00000507955 IGLV1-36A0A0B4J1U3 117 aa13.02□□□□□ -0.33
DDX41-208ENST00000507955 CIB4A0PJX0 185 aa13.02□□□□□ -0.33
DDX41-208ENST00000507955 LINC00862A6NCI5 91 aa13.02□□□□□ -0.33
DDX41-208ENST00000507955 ITGA10O75578 1167 aa13.02□□□□□ -0.33
DDX41-208ENST00000507955 CDK2P24941 298 aa13.02□□□□□ -0.33
DDX41-208ENST00000507955 EFNB2P52799 333 aa13.02□□□□□ -0.33
DDX41-208ENST00000507955 EMP2P54851 167 aa13.02□□□□□ -0.33
DDX41-208ENST00000507955 FOXF1Q12946 379 aa13.02□□□□□ -0.33
DDX41-208ENST00000507955 SEZ6L2Q6UXD5 910 aa13.02□□□□□ -0.33
DDX41-208ENST00000507955 OR10G3Q8NGC4 313 aa13.02□□□□□ -0.33
DDX41-208ENST00000507955 NARFLQ9H6Q4 476 aa13.02□□□□□ -0.33
DDX41-208ENST00000507955 KLRF1Q9NZS2 232 aa13.02□□□□□ -0.33
DDX41-208ENST00000507955 EIF3KQ9UBQ5 218 aaKnown RBP13.02□□□□□ -0.33
DDX41-208ENST00000507955 RPS10-NUDT3A0A1W2PQS6 291 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 OR6C76A6NM76 312 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 FTCDNL1E5RQL4 147 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 SSNA1O43805 119 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 CD1AP06126 327 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms