RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 TCRBV3S1A0A5B6 114 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 SLC22A23A1A5C7 686 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 ARRDC5A6NEK1 342 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 VSTM5A8MXK1 200 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 IMPA2O14732 288 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 IDH3BO43837 385 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 CELA3BP08861 270 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 ZNF14P17017 642 aaPredicted RBP14.49□□□□□ -0.09
SNCA-209ENST00000506244 GSTM3P21266 225 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 NOS3P29474 1203 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 APOBEC3AP31941 199 aaPredicted RBP14.49□□□□□ -0.09
SNCA-209ENST00000506244 TTKP33981 857 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 FXYD6P3P58550 94 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 PCBD1P61457 104 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 NKX6-1P78426 367 aaPredicted RBP14.49□□□□□ -0.09
SNCA-209ENST00000506244 PLP2Q04941 152 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 CCDC121Q6ZUS5 278 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 JAZF1Q86VZ6 243 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 AQP11Q8NBQ7 271 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 RASD2Q96D21 266 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 PERPQ96FX8 193 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 ERMAPQ96PL5 475 aaPredicted RBP14.49□□□□□ -0.09
SNCA-209ENST00000506244 SH3GL3Q99963 347 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 IFT27Q9BW83 186 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 NOX3Q9HBY0 568 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 CA10Q9NS85 328 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 ZNF701Q9NV72 531 aaPredicted RBP14.49□□□□□ -0.09
SNCA-209ENST00000506244 SPEF1Q9Y4P9 236 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 UGT2A1Q9Y4X1 527 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 IER3IP1Q9Y5U9 82 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 U3KQV3 271 aa14.49□□□□□ -0.09
SNCA-209ENST00000506244 HEATR1Q9H583 2144 aaKnown RBP14.48□□□□□ -0.09
SNCA-209ENST00000506244 A0A1W2PPL8 197 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 H7C1C5 153 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 SOCS2O14508 198 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 ARPC3O15145 178 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 E2F6O75461 281 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 CIB2O75838 187 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 PPP1R3DO95685 299 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 SERPINA5P05154 406 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 PTH2RP49190 550 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 RPS23P62266 143 aaKnown RBP14.48□□□□□ -0.09
SNCA-209ENST00000506244 LCN6P62502 163 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 GALK2Q01415 458 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 HSF2Q03933 536 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 SGCAQ16586 387 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 FAM27BQ5VT28 67 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 ZNF770Q6IQ21 691 aaPredicted RBP14.48□□□□□ -0.09
SNCA-209ENST00000506244 PRSS57Q6UWY2 283 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 RASSF6Q6ZTQ3 369 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 FOXL2NBQ6ZUU3 175 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 MYPOPQ86VE0 399 aaPredicted RBP14.48□□□□□ -0.09
SNCA-209ENST00000506244 LRRC18Q8N456 261 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 CLDN22Q8N7P3 220 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 OR10G2Q8NGC3 310 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 NABP1Q96AH0 204 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 SNX18Q96RF0 628 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 DGCR6LQ9BY27 220 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 ZNF442Q9H7R0 627 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 SEC61A2Q9H9S3 476 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 TBC1D23Q9NUY8 699 aa14.48□□□□□ -0.09
SNCA-209ENST00000506244 VSX1Q9NZR4 365 aaPredicted RBP14.48□□□□□ -0.09
SNCA-209ENST00000506244 FBXO9Q9UK97 447 aaPredicted RBP14.48□□□□□ -0.09
SNCA-209ENST00000506244 IGKV1D-43A0A0B4J1Z2 117 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 IQCMA0A1B0GVH7 501 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 OVOL3O00110 214 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 FKBP6O75344 327 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 RENP00797 406 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 MSR1P21757 451 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 CRABP1P29762 137 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 CALCRP30988 508 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 CDAP32320 146 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 ATP5J2P56134 94 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 CBX1P83916 185 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 DAG1Q14118 895 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 ETFDHQ16134 617 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 Q5PR19 223 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 C1orf146Q5VVC0 180 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 OR1J2Q8NGS2 313 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 MS4A3Q96HJ5 214 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 SAMD8Q96LT4 415 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 ZNF75AQ96N20 296 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 WACQ9BTA9 647 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 SYT4Q9H2B2 425 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 BARX1Q9HBU1 254 aaPredicted RBP14.47□□□□□ -0.09
SNCA-209ENST00000506244 VNN3Q9NY84 501 aa14.47□□□□□ -0.09
SNCA-209ENST00000506244 C12orf71A8MTZ7 269 aa14.46□□□□□ -0.09
SNCA-209ENST00000506244 EBAG9O00559 213 aa14.46□□□□□ -0.09
SNCA-209ENST00000506244 DEAF1O75398 565 aaPredicted RBP14.46□□□□□ -0.09
SNCA-209ENST00000506244 KHDRBS3O75525 346 aaKnown RBP14.46□□□□□ -0.09
SNCA-209ENST00000506244 CST2P09228 141 aa14.46□□□□□ -0.09
SNCA-209ENST00000506244 ARHGDIAP52565 204 aa14.46□□□□□ -0.09
SNCA-209ENST00000506244 SNRPD2P62316 118 aaKnown RBP14.46□□□□□ -0.09
SNCA-209ENST00000506244 SNTB2Q13425 540 aaKnown RBP14.46□□□□□ -0.09
SNCA-209ENST00000506244 RAB39AQ14964 217 aa14.46□□□□□ -0.09
SNCA-209ENST00000506244 TBC1D28Q2M2D7 210 aa14.46□□□□□ -0.09
SNCA-209ENST00000506244 TGIF2LYQ8IUE0 185 aa14.46□□□□□ -0.09
SNCA-209ENST00000506244 PAPD5Q8NDF8 572 aaKnown RBP14.46□□□□□ -0.09
SNCA-209ENST00000506244 SLC30A7Q8NEW0 376 aa14.46□□□□□ -0.09
SNCA-209ENST00000506244 GIPC3Q8TF64 312 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms