RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 MPZL1O95297 269 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 CLIC3O95833 236 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 WNT11O96014 354 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 IGKV3-15P01624 115 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 IGLV1-44P01699 117 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 IGHG1P01857 330 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 GYPBP06028 91 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 QDPRP09417 244 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 SPI1P17947 270 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 MPGP29372 298 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 RPL4P36578 427 aaKnown RBP4.32□□□□□ -1.72
LMNB1-208ENST00000504788 ARHGDIAP52565 204 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 SLC25A1P53007 311 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 MRPS34P82930 218 aaKnown RBP4.32□□□□□ -1.72
LMNB1-208ENST00000504788 SORDQ00796 357 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 ROR2Q01974 943 aaKnown RBP4.32□□□□□ -1.72
LMNB1-208ENST00000504788 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.32□□□□□ -1.72
LMNB1-208ENST00000504788 TOP3AQ13472 1001 aaPredicted RBP4.32□□□□□ -1.72
LMNB1-208ENST00000504788 C1DQ13901 141 aaKnown RBP4.32□□□□□ -1.72
LMNB1-208ENST00000504788 KEAP1Q14145 624 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 TAB1Q15750 504 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 RSPO1Q2MKA7 263 aaPredicted RBP4.32□□□□□ -1.72
LMNB1-208ENST00000504788 CEACAM16Q2WEN9 425 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 ZIK1Q3SY52 487 aaPredicted RBP4.32□□□□□ -1.72
LMNB1-208ENST00000504788 THEM4Q5T1C6 240 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 FAM27BQ5VT28 67 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 OTPQ5XKR4 325 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 UGT2A3Q6UWM9 527 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 SKA3Q8IX90 412 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 TIGD4Q8IY51 512 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 C1orf162Q8NEQ5 155 aaPredicted RBP4.32□□□□□ -1.72
LMNB1-208ENST00000504788 OR52E2Q8NGJ4 325 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 OR10S1Q8NGN2 331 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 OR1K1Q8NGR3 316 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 RHOXF1Q8NHV9 184 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 RNASE6Q93091 150 aaKnown RBP4.32□□□□□ -1.72
LMNB1-208ENST00000504788 FBXO17Q96EF6 278 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 POM121Q96HA1 1249 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 SIGLEC11Q96RL6 698 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 IFT27Q9BW83 186 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 OR10A4Q9H209 315 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 MED20Q9H944 212 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 PNRC2Q9NPJ4 139 aaKnown RBP4.32□□□□□ -1.72
LMNB1-208ENST00000504788 C8orf4Q9NR00 106 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 TMEM38BQ9NVV0 291 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 ELOVL5Q9NYP7 299 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 COQ3Q9NZJ6 369 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 CRNNQ9UBG3 495 aaPredicted RBP4.32□□□□□ -1.72
LMNB1-208ENST00000504788 GRHPRQ9UBQ7 328 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 BAIAP2Q9UQB8 552 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 GPR52Q9Y2T5 361 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 KLF2Q9Y5W3 355 aaPredicted RBP4.32□□□□□ -1.72
LMNB1-208ENST00000504788 SLC25A15Q9Y619 301 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 FKBP7Q9Y680 259 aa4.32□□□□□ -1.72
LMNB1-208ENST00000504788 CHD3Q12873 2000 aaKnown RBP4.31□□□□□ -1.72
LMNB1-208ENST00000504788 ARPC4-TTLL3A0A0A6YYG9 625 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 A6NIZ1 184 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 FAM90A27PA6NNH2 459 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 PRR32B1ATL7 298 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 H0YAE9 185 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 ICMTO60725 284 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 SLC43A1O75387 559 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 SMNDC1O75940 238 aaKnown RBP eCLIP4.31□□□□□ -1.72
LMNB1-208ENST00000504788 SEC14L2O76054 403 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 AGFG2O95081 481 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 AVPP01185 164 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 HRGP04196 525 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 CDAP32320 146 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 SLC15A1P46059 708 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 CSNK1A1P48729 337 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 SMCPP49901 116 aaPredicted RBP4.31□□□□□ -1.72
LMNB1-208ENST00000504788 SMSP52788 366 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 RAD23AP54725 363 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 RAP1BP61224 184 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 SNRPGP62308 76 aaKnown RBP4.31□□□□□ -1.72
LMNB1-208ENST00000504788 RAP1AP62834 184 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 ARF1P84077 181 aaKnown RBP4.31□□□□□ -1.72
LMNB1-208ENST00000504788 SNTB1Q13884 538 aaKnown RBP4.31□□□□□ -1.72
LMNB1-208ENST00000504788 DOC2BQ14184 412 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 KRTAP27-1Q3LI81 207 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 TBRG1Q3YBR2 411 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 HIKESHIQ53FT3 197 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF691Q5VV52 312 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 CARD17Q5XLA6 110 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 LEG1Q6P5S2 330 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 B3GLCTQ6Y288 498 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 CPOQ8IVL8 374 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 MCEMP1Q8IX19 187 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 DMRTC2Q8IXT2 367 aaPredicted RBP4.31□□□□□ -1.72
LMNB1-208ENST00000504788 GPR137CQ8N3F9 429 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 GALNT4Q8N4A0 578 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 OR9Q1Q8NGQ5 310 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 TEX47Q8TBZ9 253 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 TMEM163Q8TC26 289 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 FNDC8Q8TC99 324 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 ST7LQ8TDW4 575 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 CA5BP1Q8WTZ4 195 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 S100PBPQ96BU1 408 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 WFIKKN1Q96NZ8 548 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 FOXB1Q99853 325 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms