RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810		A0A1W2PPL8	197 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810		A6NIZ1	184 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810		B9A039	149 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	PAX4	O43316	350 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	STAMBP	O95630	424 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	LY6G6D	O95868	133 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	PTH	P01270	115 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	IGLV1-44	P01699	117 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	H1F0	P07305	194 aa	Known RBP	9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	SLC9A3	P48764	834 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	CTXN1	P60606	82 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	RAP1B	P61224	184 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	RAP1A	P62834	184 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	SPIB	Q01892	262 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	ID3	Q02535	119 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	RAB39A	Q14964	217 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	TBC1D28	Q2M2D7	210 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	C8orf82	Q6P1X6	216 aa	Predicted RBP	9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	DPPA2	Q7Z7J5	298 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	MYPOP	Q86VE0	399 aa	Predicted RBP	9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	MEX3D	Q86XN8	651 aa	Known RBP	9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	RNF113B	Q8IZP6	322 aa	Known RBP	9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	SVOPL	Q8N434	492 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	LRRC18	Q8N456	261 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	ANKS4B	Q8N8V4	417 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	FAM156A	Q8NDB6	213 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	MAPK1IP1L	Q8NDC0	245 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	RBM15B	Q8NDT2	890 aa	Known RBP	9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	NUP37	Q8NFH4	326 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	OR13C2	Q8NGS9	318 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	NSMAF	Q92636	917 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	NSMCE2	Q96MF7	247 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	RBP7	Q96R05	134 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	SH3GL3	Q99963	347 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	PIMREG	Q9BSJ6	248 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	REG4	Q9BYZ8	158 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	RAB1B	Q9H0U4	201 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	LRMDA	Q9H2I8	198 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	TXNIP	Q9H3M7	391 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	C1orf198	Q9H425	327 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	PLK3	Q9H4B4	646 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	DENND2D	Q9H6A0	471 aa	Predicted RBP	9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	TMEM38B	Q9NVV0	291 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	CMAHP	Q9Y471	501 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	SNX13	Q9Y5W8	968 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810	ENPP4	Q9Y6X5	453 aa		9.24	□□□□□ -0.93
CDK11A-222	ENST00000498810		A0A1W2PPW3	197 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	SH3PXD2B	A1X283	911 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	ZNF503-AS2	A6NEH8	195 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	CENPBD1	B2RD01	187 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	TRMU	O75648	421 aa	Known RBP	9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	SLC2A10	O95528	541 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	CCNO	P22674	350 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	PCSK6	P29122	969 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	APLNR	P35414	380 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	THBS4	P35443	961 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	PDLIM4	P50479	330 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	EFNA4	P52798	201 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	SMIM11A	P58511	58 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	SELENOV	P59797	346 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	RPL27	P61353	136 aa	Known RBP	9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	PRKCD	Q05655	676 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	FMOD	Q06828	376 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	ADIPOQ	Q15848	244 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	SGCA	Q16586	387 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	ANKDD1A	Q495B1	522 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	MBOAT2	Q6ZWT7	520 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	DEFB107A	Q8IZN7	70 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	ZNF525	Q8N782	197 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	CCDC197	Q8NCU1	140 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	SLC30A7	Q8NEW0	376 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	OR1J2	Q8NGS2	313 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	FNDC8	Q8TC99	324 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	MCHR2	Q969V1	340 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	ZNF570	Q96NI8	536 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	CDRT15	Q96T59	188 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	OR51B6	Q9H340	312 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	ANKRD19P	Q9H560	264 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	ZNF442	Q9H7R0	627 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	GRHPR	Q9UBQ7	328 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	SLC7A8	Q9UHI5	535 aa		9.23	□□□□□ -0.93
CDK11A-222	ENST00000498810	CHD3	Q12873	2000 aa	Known RBP	9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810		A0A087WUU8	490 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	ARPC2	O15144	300 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	FABP3	P05413	133 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	LCK	P06239	509 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	PATE4	P0C8F1	98 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	SLC25A16	P16260	332 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	RHCE	P18577	417 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	MAK	P20794	623 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	PPOX	P50336	477 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	RUNX1T1	Q06455	604 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	ZNF627	Q7L945	461 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	KRTAP19-1	Q8IUB9	90 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	WDFY1	Q8IWB7	410 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	SKA3	Q8IX90	412 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	OR52J3	Q8NH60	311 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	SNX33	Q8WV41	574 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	LIPH	Q8WWY8	451 aa		9.22	□□□□□ -0.93
CDK11A-222	ENST00000498810	SORCS2	Q96PQ0	1159 aa		9.22	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms