RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 CYB561A3Q8NBI2 242 aa17.58■□□□□ 0.4
CTSD-206ENST00000497544 ZNF555Q8NEP9 628 aa17.58■□□□□ 0.4
CTSD-206ENST00000497544 OTULINQ96BN8 352 aa17.58■□□□□ 0.4
CTSD-206ENST00000497544 MUS81Q96NY9 551 aa17.58■□□□□ 0.4
CTSD-206ENST00000497544 DDOQ99489 341 aa17.58■□□□□ 0.4
CTSD-206ENST00000497544 FOXB1Q99853 325 aa17.58■□□□□ 0.4
CTSD-206ENST00000497544 OR10A4Q9H209 315 aa17.58■□□□□ 0.4
CTSD-206ENST00000497544 NDRG3Q9UGV2 375 aa17.58■□□□□ 0.4
CTSD-206ENST00000497544 IGKV1D-43A0A0B4J1Z2 117 aa17.57■□□□□ 0.4
CTSD-206ENST00000497544 OR6C68A6NDL8 312 aa17.57■□□□□ 0.4
CTSD-206ENST00000497544 CENPAP49450 140 aa17.57■□□□□ 0.4
CTSD-206ENST00000497544 ETFDHQ16134 617 aa17.57■□□□□ 0.4
CTSD-206ENST00000497544 GABRA6Q16445 453 aa17.57■□□□□ 0.4
CTSD-206ENST00000497544 C12orf73Q69YU5 71 aa17.57■□□□□ 0.4
CTSD-206ENST00000497544 ZNF813Q6ZN06 617 aa17.57■□□□□ 0.4
CTSD-206ENST00000497544 C1orf162Q8NEQ5 155 aaPredicted RBP17.57■□□□□ 0.4
CTSD-206ENST00000497544 OR1K1Q8NGR3 316 aa17.57■□□□□ 0.4
CTSD-206ENST00000497544 NRG4Q8WWG1 115 aa17.57■□□□□ 0.4
CTSD-206ENST00000497544 TSSK2Q96PF2 358 aa17.57■□□□□ 0.4
CTSD-206ENST00000497544 GRIP2Q9C0E4 1043 aa17.57■□□□□ 0.4
CTSD-206ENST00000497544 ACTR6Q9GZN1 396 aa17.57■□□□□ 0.4
CTSD-206ENST00000497544 SEC61A2Q9H9S3 476 aa17.57■□□□□ 0.4
CTSD-206ENST00000497544 NPDC1Q9NQX5 325 aaPredicted RBP17.57■□□□□ 0.4
CTSD-206ENST00000497544 FKBP7Q9Y680 259 aa17.57■□□□□ 0.4
CTSD-206ENST00000497544 A0A1W2PPL8 197 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 PRR23D1E9PI22 279 aaPredicted RBP17.56■□□□□ 0.4
CTSD-206ENST00000497544 PRR23D2P0DMB1 279 aaPredicted RBP17.56■□□□□ 0.4
CTSD-206ENST00000497544 PPP3CBP16298 524 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 CTLA4P16410 223 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 HOXC12P31275 282 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 KRTAP10-9P60411 292 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 CDC42P60953 191 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 SGCAQ16586 387 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 OR6V1Q8N148 313 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 OR2T4Q8NH00 348 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 BCL2L2Q92843 193 aaPredicted RBP17.56■□□□□ 0.4
CTSD-206ENST00000497544 S100PBPQ96BU1 408 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 HRASLS5Q96KN8 279 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 MBOAT4Q96T53 435 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 FN3KQ9H479 309 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 FAM118AQ9NWS6 357 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 B9D1Q9UPM9 204 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 GMPPBQ9Y5P6 360 aa17.56■□□□□ 0.4
CTSD-206ENST00000497544 A0A096LPE4 126 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 LOC100130705A0A1B0GUX0 176 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 A0A1W2PPZ6 126 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 TUBAL3A6NHL2 446 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 FAM183AA6NL82 134 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 C19orf84I3L1E1 186 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 SEC14L2O76054 403 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 FARS2O95363 451 aaKnown RBP17.55■□□□□ 0.4
CTSD-206ENST00000497544 OR8G3PP0DMU2 310 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 HOXB1P14653 301 aaPredicted RBP17.55■□□□□ 0.4
CTSD-206ENST00000497544 NPR2P20594 1047 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 CDAP32320 146 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 PTDSS1P48651 473 aaKnown RBP17.55■□□□□ 0.4
CTSD-206ENST00000497544 UBE2NP61088 152 aaKnown RBP17.55■□□□□ 0.4
CTSD-206ENST00000497544 SNTB1Q13884 538 aaKnown RBP17.55■□□□□ 0.4
CTSD-206ENST00000497544 TIMM23BQ5SRD1 257 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 KLHL24Q6TFL4 600 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 CDH24Q86UP0 819 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 P2RY8Q86VZ1 359 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 C17orf78Q8N4C9 275 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 DHRSXQ8N5I4 330 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 TCEANCQ8N8B7 351 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 LINC01560Q8TB33 94 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 MUCL1Q96DR8 90 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 MED18Q9BUE0 208 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 TMEM38BQ9NVV0 291 aa17.55■□□□□ 0.4
CTSD-206ENST00000497544 COA3Q9Y2R0 106 aaPredicted RBP17.55■□□□□ 0.4
CTSD-206ENST00000497544 OR5H1A6NKK0 313 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 DCTN6O00399 190 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 DLGAP1O14490 977 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 TLX2O43763 284 aaPredicted RBP17.54■□□□□ 0.4
CTSD-206ENST00000497544 B4GALT1P15291 398 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 LAP3P28838 519 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 GGT2P36268 569 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 SLC25A1P53007 311 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 MRPS34P82930 218 aaKnown RBP17.54■□□□□ 0.4
CTSD-206ENST00000497544 TBRG1Q3YBR2 411 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 HIKESHIQ53FT3 197 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 FBXW10Q5XX13 1052 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 PLBD1Q6P4A8 553 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 ZNF627Q7L945 461 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 ZBTB46Q86UZ6 589 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 CPOQ8IVL8 374 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 ZNF295-AS1Q8N0V1 137 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 SLC22A24Q8N4F4 322 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 OR9Q1Q8NGQ5 310 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 HSD17B8Q92506 261 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 PTP4A1Q93096 173 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 BOD1Q96IK1 185 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 WFIKKN1Q96NZ8 548 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 KCNN2Q9H2S1 579 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 MED20Q9H944 212 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 SLC17A5Q9NRA2 495 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 IMPAD1Q9NX62 359 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 H2AFY2Q9P0M6 372 aaPredicted RBP17.54■□□□□ 0.4
CTSD-206ENST00000497544 UGT2A1Q9Y4X1 527 aa17.54■□□□□ 0.4
CTSD-206ENST00000497544 FAM171A2A8MVW0 826 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms