RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 RUNX1T1Q06455 604 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 C17orf67Q0P5P2 114 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 ELAVL2Q12926 359 aaKnown RBP2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 PLD1Q13393 1074 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 SPHARQ15513 63 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 SSX2Q16385 188 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 SYPL1Q16563 259 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 C9orf152Q5JTZ5 239 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 LINC01590Q5TEZ4 76 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 LYPLAL1Q5VWZ2 237 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 C3orf33Q6P1S2 294 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 PAQR6Q6TCH4 344 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 DHRS13Q6UX07 377 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 IL34Q6ZMJ4 242 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF852Q6ZMS4 543 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 LINC00696Q6ZRV3 163 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 SERINC5Q86VE9 423 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 LINC00346Q8IVM7 164 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR6V1Q8N148 313 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 LRRC18Q8N456 261 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 Q8N976 141 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR8J1Q8NGP2 316 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR8K3Q8NH51 312 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 NFKBIDQ8NI38 313 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 FIBINQ8TAL6 211 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 UBA3Q8TBC4 463 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC7A13Q8TCU3 470 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 KCNE4Q8WWG9 221 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 IGSF8Q969P0 613 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 C3orf49Q96BT1 292 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 PCED1BQ96HM7 432 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 C14orf144Q96I85 54 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF558Q96NG5 402 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 RNF126Q9BV68 326 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 TRIM62Q9BVG3 475 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 PRRG3Q9BZD7 231 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 SFXN1Q9H9B4 322 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 CACYBPQ9HB71 228 aaKnown RBP2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 ABRACLQ9P1F3 81 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 IKZF2Q9UKS7 526 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 CLDN16Q9Y5I7 305 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 NINQ8N4C6 2090 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 TRBV4-1A0A0J9YWV2 114 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 GABARAPH6UMI1 98 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 IMPA2O14732 288 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 TSPAN4O14817 238 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 STX7O15400 261 aaKnown RBP2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 SH3BGRLO75368 114 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 UPK3AO75631 287 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 SCO1O75880 301 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 IFNA10P01566 189 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 MMP3P08254 477 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 CLUP10909 449 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 CSF2RAP15509 400 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 PRKACGP22612 351 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZBTB25P24278 435 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 COMPP49747 757 aaPredicted RBP2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 CTSCP53634 463 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 RAP1AP62834 184 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 FKBP1BP68106 108 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 PRSS8Q16651 343 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF630Q2M218 657 aaPredicted RBP2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 C18orf21Q32NC0 220 aaPredicted RBP2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 RAET1GQ6H3X3 334 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 PYHIN1Q6K0P9 492 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 HEPN1Q6WQI6 88 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 DEF8Q6ZN54 512 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF620Q6ZNG0 422 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 MEPCEQ7L2J0 689 aaKnown RBP2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 VTCN1Q7Z7D3 282 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 HORMAD1Q86X24 394 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 FAM9CQ8IZT9 166 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 PUSL1Q8N0Z8 303 aaKnown RBP2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 MMP21Q8N119 569 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF283Q8N7M2 679 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 ATP6V1C2Q8NEY4 427 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR10A6Q8NH74 314 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 EEF1AKMT1Q8WVE0 214 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 AQP3Q92482 292 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 RAB7BQ96AH8 199 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 FAM149B1Q96BN6 582 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 MS4A4EQ96PG1 132 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 RIBC2Q9H4K1 309 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 ALG9Q9H6U8 611 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 MCCC2Q9HCC0 563 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC35D1Q9NTN3 355 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 CA14Q9ULX7 337 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMED3Q9Y3Q3 217 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 ANK3Q12955 4377 aaKnown RBP2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 TRAV6A0A075B6T7 132 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 TBC1D3BA6NDS4 549 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 C4orf51C9J302 202 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 C9JQL5 133 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 SULT1C2O00338 296 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 CASKO14936 926 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 CEACAM1P13688 526 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 HOXB2P14652 356 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 MMP11P24347 488 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 PTAFRP25105 342 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 KCNK10P57789 538 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms