RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 TRBC1P01850 177 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 CSN2P05814 226 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 ACP2P11117 423 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 GTF2F2P13984 249 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 MDKP21741 143 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-205ENST00000493587 BRS3P32247 399 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 PXNP49023 591 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-205ENST00000493587 TMEM115Q12893 351 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-205ENST00000493587 DCAF4L1Q3SXM0 396 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 NKAIN1Q4KMZ8 207 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 TEX38Q6PEX7 206 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 SYT13Q7L8C5 426 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 RGL4Q8IZJ4 473 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 CLECL1Q8IZS7 167 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 COMMD1Q8N668 190 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 OR4S1Q8NGB4 309 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 OR13C8Q8NGS7 320 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 MITD1Q8WV92 249 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 GEMIN6Q8WXD5 167 aaKnown RBP6.26□□□□□ -1.41
VPS13B-205ENST00000493587 ADIPOR1Q96A54 375 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 RAB39BQ96DA2 213 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 BPIFA2Q96DR5 249 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 FAM210BQ96KR6 192 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 HIF3AQ9Y2N7 669 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF337Q9Y3M9 751 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 TRBV4-1A0A0J9YWV2 114 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 SMIM28A0A1B0GU29 152 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 ARL5CA6NH57 179 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 GPR89AB7ZAQ6 455 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 FGF16O43320 207 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 RPP40O75818 363 aaKnown RBP6.26□□□□□ -1.41
VPS13B-205ENST00000493587 TRAPPC6AO75865 159 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 IFNA21P01568 189 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 GPR89BP0CG08 455 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 LIMS3P0CW19 117 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 LIMS4P0CW20 117 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 MAKP20794 623 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 TUBG1P23258 451 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 CST5P28325 142 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-205ENST00000493587 CTHP32929 405 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 GZMMP51124 257 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 SUCLG1P53597 346 aaKnown RBP6.26□□□□□ -1.41
VPS13B-205ENST00000493587 CRYBB1P53674 252 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-205ENST00000493587 RPS23P62266 143 aaKnown RBP6.26□□□□□ -1.41
VPS13B-205ENST00000493587 PMS2P11Q13670 270 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 KIAA0040Q15053 153 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 MARC1Q5VT66 337 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 MFSD9Q8NBP5 474 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 OR51G2Q8NGK0 314 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 OR5K2Q8NHB8 316 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 ARRDC2Q8TBH0 407 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 SMPDL3BQ92485 455 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 NDRG1Q92597 394 aaKnown RBP6.26□□□□□ -1.41
VPS13B-205ENST00000493587 ARSGQ96EG1 525 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 HPDLQ96IR7 371 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 WFIKKN1Q96NZ8 548 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 ASB6Q9NWX5 421 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 OSER1Q9NX31 292 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 SOHLH2Q9NX45 425 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 NDOR1Q9UHB4 597 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 FZD10Q9ULW2 581 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 LRRK1Q38SD2 2015 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 A0A087WV62 115 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 TGIF2-C20orf24A0A0A6YYL0 155 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 GABARAPH6UMI1 98 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 MAN2B1O00754 1011 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 TGFB1P01137 390 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 GCGP01275 180 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 SEMG1P04279 462 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 PGA4P0DJD7 388 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 PGA5P0DJD9 388 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 CD79AP11912 226 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 HLA-GP17693 338 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 CHATP28329 748 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 AKT2P31751 481 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 SOAT1P35610 550 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 TSFMP43897 325 aaKnown RBP6.26□□□□□ -1.41
VPS13B-205ENST00000493587 DGKGP49619 791 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 FLT3LGP49771 235 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 SELENOTP62341 195 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF345Q14585 488 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 GPNMBQ14956 572 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 RNLSQ5VYX0 342 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 SCD5Q86SK9 330 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 MEX3DQ86XN8 651 aaKnown RBP6.26□□□□□ -1.41
VPS13B-205ENST00000493587 CMTM4Q8IZR5 234 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 SUMF2Q8NBJ7 301 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 OR5D18Q8NGL1 313 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 NFKBIDQ8NI38 313 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 ASB17Q8WXJ9 295 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 FRZBQ92765 325 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 VWCEQ96DN2 955 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 S100A16Q96FQ6 103 aaKnown RBP6.26□□□□□ -1.41
VPS13B-205ENST00000493587 ADGRE3Q9BY15 652 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 SYNPO2LQ9H987 977 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 MSL2Q9HCI7 577 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 MYNNQ9NPC7 610 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 ACER3Q9NUN7 267 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 PITPNC1Q9UKF7 332 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 CYP8B1Q9UNU6 501 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms