RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 MTHFD2LQ9H903 347 aaPredicted RBP3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 CALHM2Q9HA72 323 aa3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 LYRM4Q9HD34 91 aa3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 EXOSC4Q9NPD3 245 aaKnown RBP3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 POLE4Q9NR33 117 aa3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 SEMA4GQ9NTN9 838 aa3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 ZFP57Q9NU63 452 aa3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 TXNL4BQ9NX01 149 aaKnown RBP3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 FBXL12Q9NXK8 326 aa3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 NPAP1Q9NZP6 1156 aa3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 ZNF229Q9UJW7 825 aa3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 PILRAQ9UKJ1 303 aa3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 DHDHQ9UQ10 334 aa3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 ZNF443Q9Y2A4 671 aaPredicted RBP3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 EXOGQ9Y2C4 368 aaKnown RBP3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 CA5BQ9Y2D0 317 aa3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 YBX2Q9Y2T7 364 aaKnown RBP3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 RBMX2Q9Y388 322 aaKnown RBP3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 GRIP1Q9Y3R0 1128 aa3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 CDH10Q9Y6N8 788 aa3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 V9GYH0 126 aa3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 KIAA1549LQ6ZVL6 1849 aa3.42□□□□□ -1.86
ATPAF1-206ENST00000492233 SMCO3A2RU48 225 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 OR6C68A6NDL8 312 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 FBLL1A6NHQ2 334 aaKnown RBP3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 CPSF4LA6NMK7 179 aaKnown RBP3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 CENPBD1B2RD01 187 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 SHISA8B8ZZ34 492 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 SURF4O15260 269 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 SLC31A1O15431 190 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 FLRT2O43155 660 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 UPK3AO75631 287 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 CDRT1O95170 752 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 LYPD3O95274 346 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 EML2O95834 649 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 IGHA1P01876 353 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 STATHP02808 62 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 THY1P04216 161 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 HMGN1P05114 100 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 RAB40ALP0C0E4 278 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 TSPAN19P0C672 248 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 SLC35G6P0C7Q6 338 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 LIMS3P0CW19 117 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 LIMS4P0CW20 117 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 TRAPPC2P0DI81 140 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 TRAPPC2BP0DI82 140 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 UGT2B7P16662 529 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 HTR1FP30939 366 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 PRDX2P32119 198 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 PTGER1P34995 402 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 MAP3K8P41279 467 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 PPT1P50897 306 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 TPMTP51580 245 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 ZNF136P52737 540 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 PDX1P52945 283 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 CDH11P55287 796 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 TPTEP56180 551 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 PRPS1P60891 318 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 RPS25P62851 125 aaKnown RBP3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 SNRPNP63162 240 aaKnown RBP3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 MRPS21P82921 87 aaKnown RBP3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 PRR20EP86478 221 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 PRR20CP86479 221 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 PRR20DP86480 221 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 PRR20BP86481 221 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 PRR20AP86496 221 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 SORDQ00796 357 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 EGR3Q06889 387 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 CD300CQ08708 224 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 DMWDQ09019 674 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 ZNF155Q12901 538 aaPredicted RBP3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 ASAH1Q13510 395 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 GPR50Q13585 617 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 P2RY14Q15391 338 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 LTB4RQ15722 352 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 ZNF79Q15937 498 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 EXT1Q16394 746 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 ACKR1Q16570 336 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 SGCAQ16586 387 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 DUSP5Q16690 384 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 EIPR1Q53HC9 387 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 MANEAQ5SRI9 462 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 OR2G6Q5TZ20 316 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 AGAP6Q5VW22 663 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 LIPKQ5VXJ0 399 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 NKAIN2Q5VXU1 208 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 NXNL2Q5VZ03 156 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 BICRALQ6AI39 1079 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 VASNQ6EMK4 673 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 TYW3Q6IPR3 259 aaKnown RBP3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 RNASEKQ6P5S7 137 aaKnown RBP3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 XKRXQ6PP77 449 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 FIGLAQ6QHK4 219 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 CBLN3Q6UW01 205 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 PARM1Q6UWI2 310 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 SHISA2Q6UWI4 295 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 ZNF730Q6ZMV8 503 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 ZNF836Q6ZNA1 936 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 ZNF620Q6ZNG0 422 aa3.41□□□□□ -1.86
ATPAF1-206ENST00000492233 C8orf86Q6ZUL3 223 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms