RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 PGGHGQ32M88 737 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 MBOAT1Q6ZNC8 495 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 HDDC2Q7Z4H3 204 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 CMC1Q7Z7K0 106 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 C11orf53Q8IXP5 236 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 JAGN1Q8N5M9 183 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 OR2G3Q8NGZ4 309 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 NUBPLQ8TB37 319 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 ECHDC3Q96DC8 303 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 OPALINQ96PE5 141 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 RASL11BQ9BPW5 248 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 OSBPL10Q9BXB5 764 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 SLC7A5P2Q9GIP4 190 aa3.01□□□□□ -1.93
XRN1-213ENST00000489241 RPF2Q9H7B2 306 aaKnown RBP3.01□□□□□ -1.93
XRN1-213ENST00000489241 EML4Q9HC35 981 aaKnown RBP3.01□□□□□ -1.93
XRN1-213ENST00000489241 STOX2Q9P2F5 926 aaPredicted RBP3.01□□□□□ -1.93
XRN1-213ENST00000489241 AGRNO00468 2067 aa3□□□□□ -1.93
XRN1-213ENST00000489241 UBN2Q6ZU65 1347 aa3□□□□□ -1.93
XRN1-213ENST00000489241 A0A0B4J2A0 478 aa3□□□□□ -1.93
XRN1-213ENST00000489241 A8MU10 97 aa3□□□□□ -1.93
XRN1-213ENST00000489241 H0YHG0 523 aa3□□□□□ -1.93
XRN1-213ENST00000489241 ZBTB5O15062 677 aa3□□□□□ -1.93
XRN1-213ENST00000489241 SIVA1O15304 175 aa3□□□□□ -1.93
XRN1-213ENST00000489241 DPM1O60762 260 aa3□□□□□ -1.93
XRN1-213ENST00000489241 UTS2O95399 124 aa3□□□□□ -1.93
XRN1-213ENST00000489241 FGFR1OPO95684 399 aaKnown RBP3□□□□□ -1.93
XRN1-213ENST00000489241 LY6G6DO95868 133 aa3□□□□□ -1.93
XRN1-213ENST00000489241 C6orf47O95873 294 aa3□□□□□ -1.93
XRN1-213ENST00000489241 MOSP00540 346 aa3□□□□□ -1.93
XRN1-213ENST00000489241 HLA-HP01893 362 aa3□□□□□ -1.93
XRN1-213ENST00000489241 HPNP05981 417 aa3□□□□□ -1.93
XRN1-213ENST00000489241 GIPP09681 153 aaPredicted RBP3□□□□□ -1.93
XRN1-213ENST00000489241 IGHV3-43DP0DP04 118 aa3□□□□□ -1.93
XRN1-213ENST00000489241 HPGDP15428 266 aa3□□□□□ -1.93
XRN1-213ENST00000489241 FUT3P21217 361 aa3□□□□□ -1.93
XRN1-213ENST00000489241 HTR1EP28566 365 aa3□□□□□ -1.93
XRN1-213ENST00000489241 OR1E1P30953 314 aa3□□□□□ -1.93
XRN1-213ENST00000489241 GPX4P36969 197 aaPredicted RBP3□□□□□ -1.93
XRN1-213ENST00000489241 BCAP31P51572 246 aa3□□□□□ -1.93
XRN1-213ENST00000489241 NUP107P57740 925 aa3□□□□□ -1.93
XRN1-213ENST00000489241 UBE2MP61081 183 aaKnown RBP3□□□□□ -1.93
XRN1-213ENST00000489241 NUTF2P61970 127 aaKnown RBP3□□□□□ -1.93
XRN1-213ENST00000489241 TWF1Q12792 350 aa3□□□□□ -1.93
XRN1-213ENST00000489241 ORC2Q13416 577 aaPredicted RBP3□□□□□ -1.93
XRN1-213ENST00000489241 GGTLC2Q14390 218 aa3□□□□□ -1.93
XRN1-213ENST00000489241 CLINT1Q14677 625 aa3□□□□□ -1.93
XRN1-213ENST00000489241 IL17AQ16552 155 aa3□□□□□ -1.93
XRN1-213ENST00000489241 SGCAQ16586 387 aa3□□□□□ -1.93
XRN1-213ENST00000489241 RNF212Q495C1 297 aa3□□□□□ -1.93
XRN1-213ENST00000489241 NKAIN1Q4KMZ8 207 aa3□□□□□ -1.93
XRN1-213ENST00000489241 LRRC10Q5BKY1 277 aa3□□□□□ -1.93
XRN1-213ENST00000489241 SPECC1LQ69YQ0 1117 aa3□□□□□ -1.93
XRN1-213ENST00000489241 SPESP1Q6UW49 350 aa3□□□□□ -1.93
XRN1-213ENST00000489241 ACP7Q6ZNF0 438 aa3□□□□□ -1.93
XRN1-213ENST00000489241 LINC00173Q6ZV60 143 aa3□□□□□ -1.93
XRN1-213ENST00000489241 PEX26Q7Z412 305 aa3□□□□□ -1.93
XRN1-213ENST00000489241 ABCA7Q8IZY2 2146 aa3□□□□□ -1.93
XRN1-213ENST00000489241 LRRC75AQ8NAA5 344 aa3□□□□□ -1.93
XRN1-213ENST00000489241 OR10G9Q8NGN4 311 aa3□□□□□ -1.93
XRN1-213ENST00000489241 OR5K2Q8NHB8 316 aa3□□□□□ -1.93
XRN1-213ENST00000489241 ACER1Q8TDN7 264 aa3□□□□□ -1.93
XRN1-213ENST00000489241 JSRP1Q96MG2 331 aaPredicted RBP3□□□□□ -1.93
XRN1-213ENST00000489241 SERPINB12Q96P63 405 aa3□□□□□ -1.93
XRN1-213ENST00000489241 P2RX4Q99571 388 aa3□□□□□ -1.93
XRN1-213ENST00000489241 GABARAPL3Q9BY60 117 aa3□□□□□ -1.93
XRN1-213ENST00000489241 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
XRN1-213ENST00000489241 ZYG11BQ9C0D3 744 aa3□□□□□ -1.93
XRN1-213ENST00000489241 IL22Q9GZX6 179 aa3□□□□□ -1.93
XRN1-213ENST00000489241 OR2AG1Q9H205 316 aa3□□□□□ -1.93
XRN1-213ENST00000489241 FBXO44Q9H4M3 255 aa3□□□□□ -1.93
XRN1-213ENST00000489241 AGPAT4Q9NRZ5 378 aa3□□□□□ -1.93
XRN1-213ENST00000489241 IL17CQ9P0M4 197 aa3□□□□□ -1.93
XRN1-213ENST00000489241 SHPKQ9UHJ6 478 aa3□□□□□ -1.93
XRN1-213ENST00000489241 KIF25-AS1Q9Y6Z4 181 aa3□□□□□ -1.93
XRN1-213ENST00000489241 CEMIPQ8WUJ3 1361 aa3□□□□□ -1.93
XRN1-213ENST00000489241 TRAV39A0A0B4J263 110 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 A0A1B0GW55 424 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 GJE1A6NN92 205 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 HIDE1A8MVS5 230 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 ZNF99A8MXY4 864 aaPredicted RBP2.99□□□□□ -1.93
XRN1-213ENST00000489241 FAM25EA8MYX2 175 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 ZNF701M0R085 212 aaPredicted RBP2.99□□□□□ -1.93
XRN1-213ENST00000489241 SLC9A3R1O14745 358 aaPredicted RBP2.99□□□□□ -1.93
XRN1-213ENST00000489241 BCKDKO14874 412 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 EMC8O43402 210 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 SRP72O76094 671 aaKnown RBP2.99□□□□□ -1.93
XRN1-213ENST00000489241 SCELO95171 688 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 AIFM1O95831 613 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 IFNW1P05000 195 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 CLTAP09496 248 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 DUX4L2P0CJ85 424 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 DUX4L3P0CJ86 424 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 DUX4L4P0CJ87 422 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 DUX4L5P0CJ88 424 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 DUX4L6P0CJ89 424 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 DUX4L7P0CJ90 424 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 U2AF2P26368 475 aaKnown RBP eCLIP2.99□□□□□ -1.93
XRN1-213ENST00000489241 CTRLP40313 264 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 NBL1P41271 181 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 KRTAP12-2P59991 146 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms