RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 ZNF26P17031 533 aaPredicted RBP15.28■□□□□ 0.04
ITGB1-215ENST00000488494 GLRXP35754 106 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 RPL4P36578 427 aaKnown RBP15.28■□□□□ 0.04
ITGB1-215ENST00000488494 RAP1BP61224 184 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 RAP1AP62834 184 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 ERVK-25P63136 954 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 TBC1D28Q2M2D7 210 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 ANKDD1AQ495B1 522 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 SAMD4BQ5PRF9 694 aaKnown RBP15.28■□□□□ 0.04
ITGB1-215ENST00000488494 TMPRSS11FQ6ZWK6 438 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 RRM2BQ7LG56 351 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 C7orf34Q96L11 122 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 OR51B6Q9H340 312 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 TPK1Q9H3S4 243 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 C1orf198Q9H425 327 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 SIAEQ9HAT2 523 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 MYOZ1Q9NP98 299 aaPredicted RBP15.28■□□□□ 0.04
ITGB1-215ENST00000488494 CCNB1IP1Q9NPC3 277 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 YAE1D1Q9NRH1 226 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 SONP18583 2426 aaKnown RBP15.27■□□□□ 0.04
ITGB1-215ENST00000488494 TRBV4-1A0A0J9YWV2 114 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 IQCMA0A1B0GVH7 501 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 VWC2LB2RUY7 222 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 M0R233 179 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 NDUFS8O00217 210 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 ARPC2O15144 300 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 FAM157BP0CG42 384 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 RHCEP18577 417 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 USF1P22415 310 aaPredicted RBP15.27■□□□□ 0.04
ITGB1-215ENST00000488494 MSX2P35548 267 aaPredicted RBP15.27■□□□□ 0.04
ITGB1-215ENST00000488494 MXRA7P84157 204 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 HSF2Q03933 536 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 PLP2Q04941 152 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 GGTLC2Q14390 218 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 SGCAQ16586 387 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 PABPC1L2AQ5JQF8 200 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 SLC25A47Q6Q0C1 308 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 NDEL1Q9GZM8 345 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 GORASP2Q9H8Y8 452 aa15.27■□□□□ 0.04
ITGB1-215ENST00000488494 MYEF2Q9P2K5 600 aaKnown RBP15.27■□□□□ 0.04
ITGB1-215ENST00000488494 JMJD1CQ15652 2540 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 ANK3Q12955 4377 aaKnown RBP15.26■□□□□ 0.03
ITGB1-215ENST00000488494 A0A1W2PPL8 197 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 A0A1W2PPW3 197 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 LOC390937A0A1W2PQ73 354 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 SYNGR3O43761 229 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 TLX2O43763 284 aaPredicted RBP15.26■□□□□ 0.03
ITGB1-215ENST00000488494 SNAP29O95721 258 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 SEMG1P04279 462 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 DAOP14920 347 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 APEX1P27695 318 aaKnown RBP15.26■□□□□ 0.03
ITGB1-215ENST00000488494 ALDH3B1P43353 468 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 NR4A2P43354 598 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 LIMS1P48059 325 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 KRT72Q14CN4 511 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 MAD2L1BPQ15013 274 aaPredicted RBP15.26■□□□□ 0.03
ITGB1-215ENST00000488494 SEC23BQ15437 767 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 ZBED5Q49AG3 693 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 MESTQ5EB52 335 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 THEM4Q5T1C6 240 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 C16orf89Q6UX73 402 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 LRP11Q86VZ4 500 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 DEFB107AQ8IZN7 70 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 ARIH2OSQ8N7S6 290 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 OR52J3Q8NH60 311 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 FNDC8Q8TC99 324 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 NEU4Q8WWR8 484 aaPredicted RBP15.26■□□□□ 0.03
ITGB1-215ENST00000488494 RSRC1Q96IZ7 334 aaKnown RBP15.26■□□□□ 0.03
ITGB1-215ENST00000488494 DHRS1Q96LJ7 313 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 ZNF570Q96NI8 536 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 RBP7Q96R05 134 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 CDRT15Q96T59 188 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 KCNN2Q9H2S1 579 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 NDE1Q9NXR1 346 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 GRHPRQ9UBQ7 328 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 CD300AQ9UGN4 299 aa15.26■□□□□ 0.03
ITGB1-215ENST00000488494 TEX13CA0A0J9YWL9 993 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 CRLF1O75462 422 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 PTHP01270 115 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 CD14P08571 375 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 ZNF16P17020 682 aaPredicted RBP15.25■□□□□ 0.03
ITGB1-215ENST00000488494 ZNF32P17041 273 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 ITGA2P17301 1181 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 APLNRP35414 380 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 EVX1P49640 407 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 ERVS71-1P61550 626 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 SPIBQ01892 262 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 C6orf52Q5T4I8 152 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 RGS7BPQ6MZT1 257 aaPredicted RBP15.25■□□□□ 0.03
ITGB1-215ENST00000488494 FAM122BQ7Z309 247 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 PRIMA1Q86XR5 153 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 CPEB3Q8NE35 698 aaKnown RBP15.25■□□□□ 0.03
ITGB1-215ENST00000488494 AKR7LQ8NHP1 331 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 RASD2Q96D21 266 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 PYURFQ96I23 114 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 Q96M85 177 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 NSMCE2Q96MF7 247 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 FOXN4Q96NZ1 517 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 BPESC1Q9GZL8 116 aa15.25■□□□□ 0.03
ITGB1-215ENST00000488494 KRCC1Q9NPI7 259 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms