RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 F6UB75 175 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 GOSR2O14653 212 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 CPLX1O14810 134 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 PSTPIP1O43586 416 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 EIF3GO75821 320 aaKnown RBP eCLIP1.18□□□□□ -2.22
SMC4-220ENST00000488017 TMEM50AO95807 157 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 FGGP02679 453 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 FABP3P05413 133 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 C2P06681 752 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 KITLGP21583 273 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 HRH1P35367 487 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 SERPINB5P36952 375 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 EPS15P42566 896 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 CDKN2BP42772 138 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 YAP1P46937 504 aaKnown RBP1.18□□□□□ -2.22
SMC4-220ENST00000488017 CYB561P49447 251 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 ZNF92Q03936 586 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 POU2AF1Q16633 256 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 IMMTQ16891 758 aaKnown RBP1.18□□□□□ -2.22
SMC4-220ENST00000488017 KCTD21Q4G0X4 260 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 C6orf226Q5I0X4 101 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 HES5Q5TA89 166 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 FBXW9Q5XUX1 488 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 SLC25A48Q6ZT89 311 aaKnown RBP1.18□□□□□ -2.22
SMC4-220ENST00000488017 H2BFWTQ7Z2G1 175 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 OR2L3Q8NG85 312 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 OR10G4Q8NGN3 311 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 SYNPRQ8TBG9 265 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 ZCCHC13Q8WW36 166 aaKnown RBP1.18□□□□□ -2.22
SMC4-220ENST00000488017 OR10C1Q96KK4 312 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 IFT74Q96LB3 600 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 ZBTB18Q99592 522 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 SH3GL1Q99961 368 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 SH3GL3Q99963 347 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 SLC39A3Q9BRY0 314 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 MRPL37Q9BZE1 423 aaKnown RBP1.18□□□□□ -2.22
SMC4-220ENST00000488017 SPNS1Q9H2V7 528 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 RPP21Q9H633 154 aaKnown RBP1.18□□□□□ -2.22
SMC4-220ENST00000488017 CWH43Q9H720 699 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 LRRC40Q9H9A6 602 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 C12orf10Q9HB07 376 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 HYPKQ9NX55 129 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 PEX16Q9Y5Y5 336 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 RFNGQ9Y644 331 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 CAMTA1Q9Y6Y1 1673 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 TUBGCP6Q96RT7 1819 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 IGKV3D-11A0A0A0MRZ8 115 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 IGHV3-66A0A0C4DH42 116 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 CLRN2A0PK11 232 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 SPECC1L-ADORA2AF8WAN1 911 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 CXCL11O14625 94 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 GABARAPO95166 117 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 VAMP5O95183 116 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 MX1P20591 662 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 CD34P28906 385 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 HNRNPH3P31942 346 aaKnown RBP1.17□□□□□ -2.22
SMC4-220ENST00000488017 CASP14P31944 242 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 TAGLN2P37802 199 aaKnown RBP1.17□□□□□ -2.22
SMC4-220ENST00000488017 SSR1P43307 286 aaKnown RBP1.17□□□□□ -2.22
SMC4-220ENST00000488017 UGT2B15P54855 530 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 CDH4P55283 916 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 GPX6P59796 221 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 NUTF2P61970 127 aaKnown RBP1.17□□□□□ -2.22
SMC4-220ENST00000488017 RAP1AP62834 184 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 CACNG7P62955 275 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 BST1Q10588 318 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 ARHGAP19Q14CB8 494 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 ZMYND11Q15326 602 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 MAJINQ3KP22 176 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 SPECC1LQ69YQ0 1117 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 DUX4L9Q6RFH8 374 aaPredicted RBP1.17□□□□□ -2.22
SMC4-220ENST00000488017 TMEM179Q6ZVK1 233 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 BHLHA15Q7RTS1 189 aaPredicted RBP1.17□□□□□ -2.22
SMC4-220ENST00000488017 RIMKLAQ8IXN7 391 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 OR1S2Q8NGQ3 325 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 ZNF461Q8TAF7 563 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 PLPPR1Q8TBJ4 325 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 RGP1Q92546 391 aaPredicted RBP1.17□□□□□ -2.22
SMC4-220ENST00000488017 STMN2Q93045 179 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 FAM3DQ96BQ1 224 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 TUBGCP3Q96CW5 907 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 RBMXL1Q96E39 390 aaKnown RBP1.17□□□□□ -2.22
SMC4-220ENST00000488017 PDXPQ96GD0 296 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 P2RX4Q99571 388 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 KCTD14Q9BQ13 255 aaPredicted RBP1.17□□□□□ -2.22
SMC4-220ENST00000488017 GCOM2Q9BZD3 368 aaPredicted RBP1.17□□□□□ -2.22
SMC4-220ENST00000488017 LINC00597Q9H2U6 94 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 NT5MQ9NPB1 228 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 SUN2Q9UH99 717 aa1.17□□□□□ -2.22
SMC4-220ENST00000488017 AHNAK2Q8IVF2 5795 aa1.16□□□□□ -2.22
SMC4-220ENST00000488017 TNS2Q63HR2 1409 aa1.16□□□□□ -2.22
SMC4-220ENST00000488017 RRP8O43159 456 aaKnown RBP1.16□□□□□ -2.22
SMC4-220ENST00000488017 SRP72O76094 671 aaKnown RBP1.16□□□□□ -2.22
SMC4-220ENST00000488017 AIFM1O95831 613 aa1.16□□□□□ -2.22
SMC4-220ENST00000488017 CLIC3O95833 236 aa1.16□□□□□ -2.22
SMC4-220ENST00000488017 SERPINA3P01011 423 aa1.16□□□□□ -2.22
SMC4-220ENST00000488017 SERPIND1P05546 499 aa1.16□□□□□ -2.22
SMC4-220ENST00000488017 BCHEP06276 602 aa1.16□□□□□ -2.22
SMC4-220ENST00000488017 ADRA2AP08913 450 aa1.16□□□□□ -2.22
SMC4-220ENST00000488017 POLR2MP0CAP2 368 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms