RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 AHCTF1Q8WYP5 2266 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 TRBV2A0A0J9YWF9 115 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 TMEM238LA0A1B0GVL6 79 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 DCDC2BA2VCK2 349 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 FAM166BA8MTA8 275 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF593O00488 134 aaPredicted RBP6.28□□□□□ -1.4
SF3A3-206ENST00000487062 GABRPO00591 440 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 OGG1O15527 345 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 AQP8O94778 261 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 GLSO94925 669 aaPredicted RBP6.28□□□□□ -1.4
SF3A3-206ENST00000487062 SYNGR4O95473 234 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 ACTL6AO96019 429 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 IL1AP01583 271 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 PF4P02776 101 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 HRGP04196 525 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 SPARCP09486 303 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 PGA4P0DJD7 388 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 PGA3P0DJD8 388 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 ALOX5APP20292 161 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 PTGS2P35354 604 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 TGFBR1P36897 503 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 MAGEA5P43359 124 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 CSNK1A1P48729 337 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 TGM4P49221 684 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 GDI2P50395 445 aaKnown RBP6.28□□□□□ -1.4
SF3A3-206ENST00000487062 TNFSF10P50591 281 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 CLDN17P56750 224 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 CLDN20P56880 219 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 PPIAP62937 165 aaKnown RBP6.28□□□□□ -1.4
SF3A3-206ENST00000487062 FABP5Q01469 135 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 RUNX1T1Q06455 604 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 SLC3A1Q07837 685 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 DBPQ10586 325 aaPredicted RBP6.28□□□□□ -1.4
SF3A3-206ENST00000487062 FOXC1Q12948 553 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 SRSF6Q13247 344 aaKnown RBP6.28□□□□□ -1.4
SF3A3-206ENST00000487062 CAMK2DQ13557 499 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 CDK5R1Q15078 307 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 BCL2A1Q16548 175 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 TEX30Q5JUR7 227 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 DMKNQ6E0U4 476 aaPredicted RBP6.28□□□□□ -1.4
SF3A3-206ENST00000487062 C22orf42Q6IC83 251 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 LYPD4Q6UWN0 246 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 IGFL2Q6UWQ7 119 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 NHLRC1Q6VVB1 395 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 CREB3L2Q70SY1 520 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.28□□□□□ -1.4
SF3A3-206ENST00000487062 GGNQ86UU5 652 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 UBQLNLQ8IYU4 475 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 FAM109AQ8N4B1 249 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 TMEM251Q8N6I4 163 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 ZFP62Q8NB50 900 aaPredicted RBP6.28□□□□□ -1.4
SF3A3-206ENST00000487062 OR9K2Q8NGE7 335 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 OR10D3Q8NH80 312 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 TBC1D15Q8TC07 691 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 SMAP2Q8WU79 429 aaPredicted RBP6.28□□□□□ -1.4
SF3A3-206ENST00000487062 S100ZQ8WXG8 99 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 SMIM19Q96E16 107 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 PELI1Q96FA3 418 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 TIMP4Q99727 224 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 MED18Q9BUE0 208 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 CDADC1Q9BWV3 514 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 MRPL13Q9BYD1 178 aaKnown RBP6.28□□□□□ -1.4
SF3A3-206ENST00000487062 TTTY10Q9BZA0 68 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 HMG20AQ9NP66 347 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 ACKR4Q9NPB9 350 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 PAQR5Q9NXK6 330 aaPredicted RBP6.28□□□□□ -1.4
SF3A3-206ENST00000487062 GALNT8Q9NY28 637 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 CRNNQ9UBG3 495 aaPredicted RBP6.28□□□□□ -1.4
SF3A3-206ENST00000487062 KCNG2Q9UJ96 466 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 MUC6Q6W4X9 2439 aa6.28□□□□□ -1.4
SF3A3-206ENST00000487062 A0A075B6Q4 140 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 IGHV3-15A0A0B4J1V0 119 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 TRAV17A0A0B4J275 112 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 A0A1W2PPL8 197 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 ZNF814B7Z6K7 855 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 E9PI62 339 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 SMAD9O15198 467 aaKnown RBP6.27□□□□□ -1.41
SF3A3-206ENST00000487062 KLK10O43240 276 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 CXCL13O43927 109 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 RAMP1O60894 148 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 ZNF254O75437 659 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 CEACAM4O75871 244 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 GATBO75879 557 aaKnown RBP6.27□□□□□ -1.41
SF3A3-206ENST00000487062 ZNF432O94892 652 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 CDRT1O95170 752 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 GPANK1O95872 356 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 CELA3AP09093 270 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 OR8G3PP0DMU2 310 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 EDN3P14138 238 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 WT1P19544 449 aaPredicted RBP6.27□□□□□ -1.41
SF3A3-206ENST00000487062 MYL9P24844 172 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 LAP3P28838 519 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 S100A5P33763 92 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 PSMB10P40306 273 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 RFC3P40938 356 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 STARP49675 285 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 RORCP51449 518 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 SUCLG1P53597 346 aaKnown RBP6.27□□□□□ -1.41
SF3A3-206ENST00000487062 CLDN15P56746 228 aa6.27□□□□□ -1.41
SF3A3-206ENST00000487062 FMODQ06828 376 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms