RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 MAD2L1BPQ15013 274 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-229ENST00000486665 CEACAM16Q2WEN9 425 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 C10orf128Q5T292 105 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 C9orf135Q5VTT2 229 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 LAIR2Q6ISS4 152 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 B3GLCTQ6Y288 498 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 LUZP2Q86TE4 346 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 ZBTB46Q86UZ6 589 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 DEPDC4Q8N2C3 294 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 OR8J1Q8NGP2 316 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 APH1BQ8WW43 257 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 ALKBH3Q96Q83 286 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-229ENST00000486665 RBM24Q9BX46 236 aaKnown RBP11.24□□□□□ -0.61
HDAC6-229ENST00000486665 PRRG3Q9BZD7 231 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 OR51V1Q9H2C8 321 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 PIGMQ9H3S5 423 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 CRLF2Q9HC73 371 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 DNAJC27Q9NZQ0 273 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 JKAMPQ9P055 326 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 COA3Q9Y2R0 106 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-229ENST00000486665 UGT2A1Q9Y4X1 527 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 PCDHGB5Q9Y5G0 923 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 CCDC182A6NF36 153 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 RPL36A-HNRNPH2H7BZ11 118 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 DVL2O14641 736 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 MSTNO14793 375 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 KHDRBS3O75525 346 aaKnown RBP11.23□□□□□ -0.61
HDAC6-229ENST00000486665 WBP4O75554 376 aaKnown RBP11.23□□□□□ -0.61
HDAC6-229ENST00000486665 MPZL1O95297 269 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 ITGA5P08648 1049 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 SLC2A5P22732 501 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 IGHV1-2P23083 117 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 MYF6P23409 242 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 CHRNB4P30926 498 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 CDAP32320 146 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 ARF1P84077 181 aaKnown RBP11.23□□□□□ -0.61
HDAC6-229ENST00000486665 CDK5R2Q13319 367 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 SLC25A30Q5SVS4 291 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 LINC01590Q5TEZ4 76 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 OTPQ5XKR4 325 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 MTFR2Q6P444 385 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 Q6ZT83 130 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 THAP5Q7Z6K1 395 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 C8orf59Q8N0T1 100 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-229ENST00000486665 GABRG1Q8N1C3 465 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 ZNF808Q8N4W9 903 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-229ENST00000486665 LILRB4Q8NHJ6 448 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 CNIH3Q8TBE1 160 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 FBLIM1Q8WUP2 373 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 HTRA1Q92743 480 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 ZNF582Q96NG8 517 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-229ENST00000486665 ANKRD60Q9BZ19 345 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 B3GAT2Q9NPZ5 323 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 MALT1Q9UDY8 824 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 LRRC42Q9Y546 428 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 FKBP7Q9Y680 259 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 MED13LQ71F56 2210 aa11.23□□□□□ -0.61
HDAC6-229ENST00000486665 EEF1E1-BLOC1S5C9J1V9 151 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 ZNF587BE7ETH6 402 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 EEF1E1O43324 174 aaKnown RBP11.22□□□□□ -0.61
HDAC6-229ENST00000486665 DENRO43583 198 aaKnown RBP11.22□□□□□ -0.61
HDAC6-229ENST00000486665 CNOT4O95628 575 aaKnown RBP11.22□□□□□ -0.61
HDAC6-229ENST00000486665 PAICSP22234 425 aaKnown RBP11.22□□□□□ -0.61
HDAC6-229ENST00000486665 MPGP29372 298 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 CRABP1P29762 137 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 MTORP42345 2549 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 CENPAP49450 140 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 APOFQ13790 326 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 TSC22D1Q15714 1073 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 OCLNQ16625 522 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 SMN1Q16637 294 aaKnown RBP11.22□□□□□ -0.61
HDAC6-229ENST00000486665 KLHL12Q53G59 568 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 LYPD4Q6UWN0 246 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 BEND4Q6ZU67 534 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 MEPCEQ7L2J0 689 aaKnown RBP11.22□□□□□ -0.61
HDAC6-229ENST00000486665 CXorf67Q86X51 503 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-229ENST00000486665 ZNF511Q8NB15 262 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 SETD9Q8NE22 299 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 PROKR2Q8NFJ6 384 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 OR2T4Q8NH00 348 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 FNDC8Q8TC99 324 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 ASB5Q8WWX0 329 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 CNBD2Q96M20 576 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 TEAD3Q99594 435 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 UBAP1Q9NZ09 502 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 COQ3Q9NZJ6 369 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 ITGB1BP2Q9UKP3 347 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 HSPE1-MOB4S4R3N1 261 aa11.22□□□□□ -0.61
HDAC6-229ENST00000486665 TVP23AA6NH52 213 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 FAM90A27PA6NNH2 459 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 MPZL2O60487 215 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 SEC14L2O76054 403 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 GLCEO94923 617 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 TFP02787 698 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 GAAP10253 952 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 COX6B1P14854 86 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 LAP3P28838 519 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 FAM27E3Q08E93 113 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 SGCAQ16586 387 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 NXNL2Q5VZ03 156 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms