RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 OR6V1Q8N148 313 aa17.42■□□□□ 0.38
COL6A2-208ENST00000485591 CYB561A3Q8NBI2 242 aa17.42■□□□□ 0.38
COL6A2-208ENST00000485591 NABP1Q96AH0 204 aa17.42■□□□□ 0.38
COL6A2-208ENST00000485591 TSSK2Q96PF2 358 aa17.42■□□□□ 0.38
COL6A2-208ENST00000485591 SLC38A2Q96QD8 506 aa17.42■□□□□ 0.38
COL6A2-208ENST00000485591 FN3KQ9H479 309 aa17.42■□□□□ 0.38
COL6A2-208ENST00000485591 B9D1Q9UPM9 204 aa17.42■□□□□ 0.38
COL6A2-208ENST00000485591 ADGRG4Q8IZF6 3080 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 A0A1W2PR80 420 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 WNT11O96014 354 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 PAX7P23759 505 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 CDAP32320 146 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 POLR2IP36954 125 aaKnown RBP17.41■□□□□ 0.38
COL6A2-208ENST00000485591 SLC25A1P53007 311 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 RIPK1Q13546 671 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 LRRC36Q1X8D7 754 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 OGFRL1Q5TC84 451 aaPredicted RBP17.41■□□□□ 0.38
COL6A2-208ENST00000485591 C12orf73Q69YU5 71 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 WFDC8Q8IUA0 241 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 PACRGLQ8N7B6 248 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 OR2T4Q8NH00 348 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 NANOS1Q8WY41 292 aaKnown RBP17.41■□□□□ 0.38
COL6A2-208ENST00000485591 NMNAT2Q9BZQ4 307 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 RERGLQ9H628 205 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 SIAEQ9HAT2 523 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 ZNF224Q9NZL3 707 aa17.41■□□□□ 0.38
COL6A2-208ENST00000485591 COA3Q9Y2R0 106 aaPredicted RBP17.41■□□□□ 0.38
COL6A2-208ENST00000485591 RRP15Q9Y3B9 282 aaKnown RBP17.41■□□□□ 0.38
COL6A2-208ENST00000485591 CASKO14936 926 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 GOSR1O95249 250 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 LAP3P28838 519 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 GUCA1AP43080 201 aaPredicted RBP17.4■□□□□ 0.38
COL6A2-208ENST00000485591 DAZAP2Q15038 168 aaPredicted RBP17.4■□□□□ 0.38
COL6A2-208ENST00000485591 FAM27BQ5VT28 67 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 DPPA2Q7Z7J5 298 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 GLB1L2Q8IW92 636 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 SKA3Q8IX90 412 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 HTRA1Q92743 480 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 PLEKHA8Q96JA3 519 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 RDH12Q96NR8 316 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 GRIP2Q9C0E4 1043 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 TOR3AQ9H497 397 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 SEC61A2Q9H9S3 476 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 MOV10Q9HCE1 1003 aaKnown RBP17.4■□□□□ 0.38
COL6A2-208ENST00000485591 SRA1Q9HD15 236 aaKnown RBP17.4■□□□□ 0.38
COL6A2-208ENST00000485591 NGBQ9NPG2 151 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 POLE4Q9NR33 117 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 TVP23BQ9NYZ1 205 aa17.4■□□□□ 0.38
COL6A2-208ENST00000485591 ZNF503-AS2A6NEH8 195 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 E9PQ18 207 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 MSR1P21757 451 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 PAICSP22234 425 aaKnown RBP17.39■□□□□ 0.37
COL6A2-208ENST00000485591 CAPZA2P47755 286 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 TUBA1BP68363 451 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 TUBA4AP68366 448 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 GLO1Q04760 184 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 SNAPC1Q16533 368 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 SGCAQ16586 387 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 TUBA1AQ71U36 451 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 OR9Q1Q8NGQ5 310 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 MBOAT4Q96T53 435 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 SH3GL3Q99963 347 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 SMPD3Q9NY59 655 aaPredicted RBP17.39■□□□□ 0.37
COL6A2-208ENST00000485591 B3GNT2Q9NY97 397 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 NPAP1Q9NZP6 1156 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 PRR14LQ5THK1 2151 aa17.39■□□□□ 0.37
COL6A2-208ENST00000485591 FAM183AA6NL82 134 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 PRR23D1E9PI22 279 aaPredicted RBP17.38■□□□□ 0.37
COL6A2-208ENST00000485591 UBL3O95164 117 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 SNAP29O95721 258 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 HLA-HP01893 362 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 PRR23D2P0DMB1 279 aaPredicted RBP17.38■□□□□ 0.37
COL6A2-208ENST00000485591 GAAP10253 952 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 SPI1P17947 270 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 DBPQ10586 325 aaPredicted RBP17.38■□□□□ 0.37
COL6A2-208ENST00000485591 KCNMB1Q16558 191 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 ZIK1Q3SY52 487 aaPredicted RBP17.38■□□□□ 0.37
COL6A2-208ENST00000485591 HIST2H2BCQ6DN03 193 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 ALKBH2Q6NS38 261 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 SLC16A14Q7RTX9 510 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 GALNT4Q8N4A0 578 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 FAM169BQ8N8A8 192 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 PROKR2Q8NFJ6 384 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 HRASLS5Q96KN8 279 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 FOXN4Q96NZ1 517 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 HCAR1Q9BXC0 346 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 HINT3Q9NQE9 182 aaKnown RBP17.38■□□□□ 0.37
COL6A2-208ENST00000485591 CRNNQ9UBG3 495 aaPredicted RBP17.38■□□□□ 0.37
COL6A2-208ENST00000485591 PKDREJQ9NTG1 2253 aa17.38■□□□□ 0.37
COL6A2-208ENST00000485591 BAHCC1Q9P281 2608 aa17.37■□□□□ 0.37
COL6A2-208ENST00000485591 UTP20O75691 2785 aaKnown RBP17.37■□□□□ 0.37
COL6A2-208ENST00000485591 A6NNC1 897 aa17.37■□□□□ 0.37
COL6A2-208ENST00000485591 DEFB108AA8MXU0 73 aa17.37■□□□□ 0.37
COL6A2-208ENST00000485591 DLGAP1O14490 977 aa17.37■□□□□ 0.37
COL6A2-208ENST00000485591 SIAH2O43255 324 aa17.37■□□□□ 0.37
COL6A2-208ENST00000485591 IGKV3-15P01624 115 aa17.37■□□□□ 0.37
COL6A2-208ENST00000485591 SCG5P05408 212 aa17.37■□□□□ 0.37
COL6A2-208ENST00000485591 CST2P09228 141 aa17.37■□□□□ 0.37
COL6A2-208ENST00000485591 CBR1P16152 277 aa17.37■□□□□ 0.37
COL6A2-208ENST00000485591 PYCR1P32322 319 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms