RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 APH1BQ8WW43 257 aa11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 TRUB1Q8WWH5 349 aaKnown RBP11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 NSMAFQ92636 917 aa11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 TMEM54Q969K7 222 aa11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 FOXN4Q96NZ1 517 aa11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 ALKBH3Q96Q83 286 aaPredicted RBP11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 RBP7Q96R05 134 aa11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 SNX18Q96RF0 628 aa11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 MRPL13Q9BYD1 178 aaKnown RBP11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 ULBP2Q9BZM5 246 aa11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 NUAK2Q9H093 628 aa11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 SRA1Q9HD15 236 aaKnown RBP11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 B3GAT2Q9NPZ5 323 aa11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 ASB6Q9NWX5 421 aa11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 GLTPQ9NZD2 209 aa11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 H2AFY2Q9P0M6 372 aaPredicted RBP11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 LRRC42Q9Y546 428 aa11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 HSPE1-MOB4S4R3N1 261 aa11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 NF1P21359 2839 aa11.78□□□□□ -0.52
ZKSCAN1-204ENST00000482979 DCTN6O00399 190 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 UPK3AO75631 287 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 SMNDC1O75940 238 aaKnown RBP eCLIP11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 CRHP06850 196 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 QDPRP09417 244 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 NR2C1P13056 603 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 CTLA4P16410 223 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 SPI1P17947 270 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 KIR2DL3P43628 341 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 OR3A2P47893 321 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 SLC25A1P53007 311 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 APOFQ13790 326 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 SMN1Q16637 294 aaKnown RBP11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 TSPO2Q5TGU0 170 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 DNM1P34Q6PK57 102 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 GID4Q8IVV7 300 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 ZNF582Q96NG8 517 aaPredicted RBP11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 DDOQ99489 341 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 NMNAT2Q9BZQ4 307 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 CXXC4Q9H2H0 198 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 PRSS50Q9UI38 385 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 FOXD3Q9UJU5 478 aaPredicted RBP11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 PROCRQ9UNN8 238 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 PCDHGB5Q9Y5G0 923 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 ITPR3Q14573 2671 aa11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 HRNRQ86YZ3 2850 aaPredicted RBP11.77□□□□□ -0.52
ZKSCAN1-204ENST00000482979 ANKHD1Q8IWZ3 2542 aaKnown RBP11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 IGKV1D-43A0A0B4J1Z2 117 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 A0A1W2PPL8 197 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 CENPBD1B2RD01 187 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 AHCYL1O43865 530 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 WBP4O75554 376 aaKnown RBP11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 TNFSF13O75888 250 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 CTSSP25774 331 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 ASCL1P50553 236 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 CDH11P55287 796 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 EFNB1P98172 346 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 CDK5R2Q13319 367 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 ETFDHQ16134 617 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 OCLNQ16625 522 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 HIST3H3Q16695 136 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 FBXL19-AS1Q494R0 122 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 THEM4Q5T1C6 240 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 C9orf135Q5VTT2 229 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 AADACL4Q5VUY2 407 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 MEDAGQ5VYS4 303 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 NXNL2Q5VZ03 156 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 TFAP2EQ6VUC0 442 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 BTLAQ7Z6A9 289 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 ZNF786Q8N393 782 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 OR6K6Q8NGW6 343 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 OR2T4Q8NH00 348 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 RNASE6Q93091 150 aaKnown RBP11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 PTP4A1Q93096 173 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 MCHR2Q969V1 340 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 FOXC2Q99958 501 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 TMUB1Q9BVT8 246 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 SFXN3Q9BWM7 321 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 OPN3Q9H1Y3 402 aaPredicted RBP11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 CLEC4MQ9H2X3 399 aaPredicted RBP11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 SLC7A10Q9NS82 523 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 UBAP1Q9NZ09 502 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 UPB1Q9UBR1 384 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 ST6GALNAC2Q9UJ37 374 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 B9D1Q9UPM9 204 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 LRCH1Q9Y2L9 728 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 FKBP7Q9Y680 259 aa11.77□□□□□ -0.53
ZKSCAN1-204ENST00000482979 IGLV1-36A0A0B4J1U3 117 aa11.76□□□□□ -0.53
ZKSCAN1-204ENST00000482979 CCDC182A6NF36 153 aa11.76□□□□□ -0.53
ZKSCAN1-204ENST00000482979 OR6C65A6NJZ3 312 aa11.76□□□□□ -0.53
ZKSCAN1-204ENST00000482979 ZNF587BE7ETH6 402 aa11.76□□□□□ -0.53
ZKSCAN1-204ENST00000482979 DVL2O14641 736 aa11.76□□□□□ -0.53
ZKSCAN1-204ENST00000482979 FAM20BO75063 409 aa11.76□□□□□ -0.53
ZKSCAN1-204ENST00000482979 KHDRBS3O75525 346 aaKnown RBP11.76□□□□□ -0.53
ZKSCAN1-204ENST00000482979 GPANK1O95872 356 aa11.76□□□□□ -0.53
ZKSCAN1-204ENST00000482979 HLA-DQA2P01906 255 aa11.76□□□□□ -0.53
ZKSCAN1-204ENST00000482979 CRABP1P29762 137 aa11.76□□□□□ -0.53
ZKSCAN1-204ENST00000482979 ROR2Q01974 943 aaKnown RBP11.76□□□□□ -0.53
ZKSCAN1-204ENST00000482979 FAPQ12884 760 aa11.76□□□□□ -0.53
ZKSCAN1-204ENST00000482979 LCN1P1Q5VSP4 162 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms