RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 ARMC4Q5T2S8 1044 aa11.52□□□□□ -0.57
CTDSP1-208ENST00000482272 TMEM154Q6P9G4 183 aa11.52□□□□□ -0.57
CTDSP1-208ENST00000482272 UNQ6126/PRO20091Q6UXV3 157 aa11.52□□□□□ -0.57
CTDSP1-208ENST00000482272 MICU2Q8IYU8 434 aa11.52□□□□□ -0.57
CTDSP1-208ENST00000482272 PAQR4Q8N4S7 273 aaPredicted RBP11.52□□□□□ -0.57
CTDSP1-208ENST00000482272 MOSPD2Q8NHP6 518 aa11.52□□□□□ -0.57
CTDSP1-208ENST00000482272 FNDC8Q8TC99 324 aa11.52□□□□□ -0.57
CTDSP1-208ENST00000482272 ZNF416Q9BWM5 594 aa11.52□□□□□ -0.57
CTDSP1-208ENST00000482272 OR51B6Q9H340 312 aa11.52□□□□□ -0.57
CTDSP1-208ENST00000482272 TXNIPQ9H3M7 391 aa11.52□□□□□ -0.57
CTDSP1-208ENST00000482272 SMURF2Q9HAU4 748 aa11.52□□□□□ -0.57
CTDSP1-208ENST00000482272 ARMCX1Q9P291 453 aa11.52□□□□□ -0.57
CTDSP1-208ENST00000482272 EIF3KQ9UBQ5 218 aaKnown RBP11.52□□□□□ -0.57
CTDSP1-208ENST00000482272 CAPN7Q9Y6W3 813 aa11.52□□□□□ -0.57
CTDSP1-208ENST00000482272 IGLV3-9A0A075B6K5 115 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 IGKV1D-43A0A0B4J1Z2 117 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 NPIPB13A6NJU9 1138 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 C17orf100A8MU93 164 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 NPIPB4C9JG80 1138 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 SLC22A2O15244 555 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 PPIHO43447 177 aaKnown RBP11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 CLPTM1O96005 669 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 MT-ND5P03915 603 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 MMP7P09237 267 aaPredicted RBP11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 IFI30P13284 250 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 DRD4P21917 467 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 CCNOP22674 350 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 TEKQ02763 1124 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 CD47Q08722 323 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 CCNIQ14094 377 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 SGCAQ16586 387 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 PCGF3Q3KNV8 242 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 KRTAP24-1Q3LI83 254 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 THEM4Q5T1C6 240 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 ARPINQ7Z6K5 226 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 GLCCI1Q86VQ1 547 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 POU5F2Q8N7G0 328 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 ICA1LQ8NDH6 482 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 OR1J1Q8NGS3 322 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 RP9Q8TA86 221 aaKnown RBP11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 HDAC2Q92769 488 aaKnown RBP11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 BPIFA2Q96DR5 249 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 PRRC1Q96M27 445 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 FNDC11Q9BVV2 318 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 HINT3Q9NQE9 182 aaKnown RBP11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 ZNF275Q9NSD4 429 aaPredicted RBP11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 A4GNTQ9UNA3 340 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 HIF3AQ9Y2N7 669 aa11.51□□□□□ -0.57
CTDSP1-208ENST00000482272 MXRA5Q9NR99 2828 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 SLC2A10O95528 541 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 TFP02787 698 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 SAGP10523 405 aaPredicted RBP11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 STOMP27105 288 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 GCH1P30793 250 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 CDAP32320 146 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 MAGEB1P43366 347 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 CTXN1P60606 82 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 RPL27P61353 136 aaKnown RBP11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 ANKDD1AQ495B1 522 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 PABPC1L2AQ5JQF8 200 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 FAM27BQ5VT28 67 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 SLC25A47Q6Q0C1 308 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 MEX3DQ86XN8 651 aaKnown RBP11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 C1orf174Q8IYL3 243 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 ALDH16A1Q8IZ83 802 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 RFLNBQ8N5W9 214 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 CPEB3Q8NE35 698 aaKnown RBP11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 CLDND2Q8NHS1 167 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 NSMAFQ92636 917 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 YIPF5Q969M3 257 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 RCN3Q96D15 328 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 ALG12Q9BV10 488 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 NARFLQ9H6Q4 476 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 DECR2Q9NUI1 292 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 CMTM6Q9NX76 183 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 NKIRAS2Q9NYR9 191 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 SNX13Q9Y5W8 968 aa11.5□□□□□ -0.57
CTDSP1-208ENST00000482272 GSTA4O15217 222 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 TPD52L2O43399 206 aaKnown RBP11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 IGHV3-13P01766 116 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 IFNW1P05000 195 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 ANPEPP15144 967 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 ZNF32P17041 273 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 CRYBB2P43320 205 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 YAP1P46937 504 aaKnown RBP11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 GDI2P50395 445 aaKnown RBP11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 ERVS71-1P61550 626 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 CCL8P80075 99 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 SRSF2Q01130 221 aaKnown RBP11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 PRKCDQ05655 676 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 TOP3AQ13472 1001 aaPredicted RBP11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 FHL1Q13642 323 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 TRAM2Q15035 370 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 ZNF718Q3SXZ3 478 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 TMEM255AQ5JRV8 349 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 FAM205BPQ63HN1 556 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 RRM2BQ7LG56 351 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 OAFQ86UD1 273 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 RNF113BQ8IZP6 322 aaKnown RBP11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 CLDN22Q8N7P3 220 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms