RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 CCDC90BQ9GZT6 254 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 NELFAQ9H3P2 528 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 WDR76Q9H967 626 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 AMBNQ9NP70 447 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 ISYNA1Q9NPH2 558 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 BATF3Q9NR55 127 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 PLSCR4Q9NRQ2 329 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 PAK1IP1Q9NWT1 392 aaPredicted RBP8.99□□□□□ -0.97
USP39-215ENST00000481409 UPB1Q9UBR1 384 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 AASSQ9UDR5 926 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 MALT1Q9UDY8 824 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 CAB39Q9Y376 341 aaPredicted RBP8.99□□□□□ -0.97
USP39-215ENST00000481409 GTF3C1Q12789 2109 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 ARHGAP21Q5T5U3 1957 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 DAPL1A0PJW8 107 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 ZNF99A8MXY4 864 aaPredicted RBP8.98□□□□□ -0.97
USP39-215ENST00000481409 ZNF587BE7ETH6 402 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 E9PLN8 166 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 H7C1C5 153 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 DCTN6O00399 190 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 MYL12BO14950 172 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 SULT1C4O75897 302 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 FARS2O95363 451 aaKnown RBP8.98□□□□□ -0.97
USP39-215ENST00000481409 HLA-DQA2P01906 255 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 GYPBP06028 91 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 SMIM18P0DKX4 95 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 GAAP10253 952 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 CD8BP10966 210 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 MSR1P21757 451 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 PYCR1P32322 319 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 OPRM1P35372 400 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 PER3P56645 1201 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 PCBD1P61457 104 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 LCN6P62502 163 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 TGFBR3Q03167 851 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 EGR3Q06889 387 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 ACSM1Q08AH1 577 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 BLMHQ13867 455 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 FAM27BQ5VT28 67 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 UBE2UQ5VVX9 321 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 CARD17Q5XLA6 110 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 TMEM154Q6P9G4 183 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 KCTD18Q6PI47 426 aaPredicted RBP8.98□□□□□ -0.97
USP39-215ENST00000481409 DEGS2Q6QHC5 323 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 PCSK4Q6UW60 755 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 ZNF367Q7RTV3 350 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 DOLPP1Q86YN1 238 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 SLC35F2Q8IXU6 374 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 SYS1Q8N2H4 156 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 KLHL36Q8N4N3 616 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 NANOGP1Q8N7R0 232 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 OTOSQ8NHW6 89 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 ZMYND19Q96E35 227 aaPredicted RBP8.98□□□□□ -0.97
USP39-215ENST00000481409 TSSK2Q96PF2 358 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 USB1Q9BQ65 265 aaKnown RBP8.98□□□□□ -0.97
USP39-215ENST00000481409 VKORC1Q9BQB6 163 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 TTYH2Q9BSA4 534 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 PIGMQ9H3S5 423 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 SIAEQ9HAT2 523 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 GPR35Q9HC97 309 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 MOV10Q9HCE1 1003 aaKnown RBP8.98□□□□□ -0.97
USP39-215ENST00000481409 ACOT13Q9NPJ3 140 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 POLE4Q9NR33 117 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 NDUFA13Q9P0J0 144 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 ERVK-18Q9QC07 812 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 ZNF629Q9UEG4 869 aaPredicted RBP8.98□□□□□ -0.97
USP39-215ENST00000481409 COA3Q9Y2R0 106 aaPredicted RBP8.98□□□□□ -0.97
USP39-215ENST00000481409 FAM215AQ9Y5M1 114 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 COMMD3-BMI1R4GMX3 469 aa8.98□□□□□ -0.97
USP39-215ENST00000481409 MGAQ8IWI9 3026 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 ARPC4-TTLL3A0A0A6YYG9 625 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 C12orf71A8MTZ7 269 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 ZNF593O00488 134 aaPredicted RBP8.97□□□□□ -0.97
USP39-215ENST00000481409 ZNF254O75437 659 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 WISP2O76076 250 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 MT-ND2P03891 347 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 HTR1AP08908 422 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 TACSTD2P09758 323 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 TMIGD3P0DMS9 266 aaPredicted RBP8.97□□□□□ -0.97
USP39-215ENST00000481409 OR8G3PP0DMU2 310 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 ALOX5APP20292 161 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 PCMT1P22061 227 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 CTSSP25774 331 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 MPGP29372 298 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 C21orf33P30042 268 aaPredicted RBP8.97□□□□□ -0.97
USP39-215ENST00000481409 KIR2DL2P43627 348 aaPredicted RBP8.97□□□□□ -0.97
USP39-215ENST00000481409 WNT4P56705 351 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 TAS2R43P59537 309 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 ADAM8P78325 824 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 EMX1Q04741 257 aaPredicted RBP8.97□□□□□ -0.97
USP39-215ENST00000481409 FMODQ06828 376 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 LY6DQ14210 128 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 SYT6Q5T7P8 510 aaPredicted RBP8.97□□□□□ -0.97
USP39-215ENST00000481409 TSPO2Q5TGU0 170 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 RTL6Q6ICC9 239 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 SLC18B1Q6NT16 456 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 RPTNQ6XPR3 784 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 PLEKHG7Q6ZR37 379 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 Q6ZT83 130 aa8.97□□□□□ -0.97
USP39-215ENST00000481409 BEND4Q6ZU67 534 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms