RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 OTPQ5XKR4 325 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 SLC25A47Q6Q0C1 308 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 UGT2A3Q6UWM9 527 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 CCDC80Q76M96 950 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 ZDHHC22Q8N966 263 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 LRRC75AQ8NAA5 344 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 C22orf15Q8WYQ4 148 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 C11orf40Q8WZ69 217 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 TAF15Q92804 592 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTPN7-212ENST00000480836 ATP6V1G3Q96LB4 118 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 POFUT1Q9H488 388 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 EVA1AQ9H8M9 152 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 VIPAS39Q9H9C1 493 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 NKIRAS2Q9NYR9 191 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 RIMS3Q9UJD0 308 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 ZNF346Q9UL40 294 aaKnown RBP11.28□□□□□ -0.6
PTPN7-212ENST00000480836 PCDHB10Q9UN67 800 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 CORO2BQ9UQ03 480 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 GRIP1Q9Y3R0 1128 aa11.28□□□□□ -0.6
PTPN7-212ENST00000480836 A0A0A6YYJ9 748 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 TRAV20A0A0B4J274 112 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 SPRY3O43610 288 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 OR7A10O76100 309 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 FSHBP01225 129 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 IGHG1P01857 330 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 EPHA1P21709 976 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 CCNOP22674 350 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 COMPP49747 757 aaPredicted RBP11.27□□□□□ -0.61
PTPN7-212ENST00000480836 CLRN1P58418 232 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 ERVK-25P63136 954 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 MRPS34P82930 218 aaKnown RBP11.27□□□□□ -0.61
PTPN7-212ENST00000480836 NFYCQ13952 458 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 TUSC1Q2TAM9 212 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 SLC36A2Q495M3 483 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 ACSM5Q6NUN0 579 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 TMEM53Q6P2H8 277 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 RFPL4BQ6ZWI9 263 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 NANOGNBQ7Z5D8 188 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 PATL1Q86TB9 770 aaKnown RBP11.27□□□□□ -0.61
PTPN7-212ENST00000480836 SNX32Q86XE0 403 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 RBM15BQ8NDT2 890 aaKnown RBP11.27□□□□□ -0.61
PTPN7-212ENST00000480836 NOXO1Q8NFA2 376 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 SLC25A40Q8TBP6 338 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 IPCEF1Q8WWN9 437 aaPredicted RBP11.27□□□□□ -0.61
PTPN7-212ENST00000480836 NSMAFQ92636 917 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 MPP4Q96JB8 637 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 ZNF583Q96ND8 569 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 SLC6A7Q99884 636 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 SLC19A3Q9BZV2 496 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 OR2J1Q9GZK6 312 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 WNT5BQ9H1J7 359 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 MMP26Q9NRE1 261 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 SNX13Q9Y5W8 968 aa11.27□□□□□ -0.61
PTPN7-212ENST00000480836 SOX21Q9Y651 276 aaPredicted RBP11.27□□□□□ -0.61
PTPN7-212ENST00000480836 KCNAB3O43448 404 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 FARS2O95363 451 aaKnown RBP11.26□□□□□ -0.61
PTPN7-212ENST00000480836 HIST1H2ABP04908 130 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 STOMP27105 288 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 LAP3P28838 519 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 RAD52P43351 418 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 SF3A3Q12874 501 aaKnown RBP eCLIP11.26□□□□□ -0.61
PTPN7-212ENST00000480836 SGCAQ16586 387 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 TBC1D28Q2M2D7 210 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 NRN1LQ496H8 165 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 TMEM154Q6P9G4 183 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 HIST3H2AQ7L7L0 130 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 IGFN1Q86VF2 1251 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 KLF14Q8TD94 323 aaPredicted RBP11.26□□□□□ -0.61
PTPN7-212ENST00000480836 FAM216AQ8WUB2 273 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 ZFAND2BQ8WV99 257 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 LIPHQ8WWY8 451 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 GEMIN6Q8WXD5 167 aaKnown RBP11.26□□□□□ -0.61
PTPN7-212ENST00000480836 CCL17Q92583 94 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 DVL3Q92997 716 aaPredicted RBP11.26□□□□□ -0.61
PTPN7-212ENST00000480836 HIST1H2ACQ93077 130 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 SGTBQ96EQ0 304 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 BCL2L14Q9BZR8 327 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 SIAEQ9HAT2 523 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 MSL2Q9HCI7 577 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 INIPQ9NRY2 104 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 SLCO1C1Q9NYB5 712 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 FBXL3Q9UKT7 428 aa11.26□□□□□ -0.61
PTPN7-212ENST00000480836 IQCMA0A1B0GVH7 501 aa11.25□□□□□ -0.61
PTPN7-212ENST00000480836 SLC22A23A1A5C7 686 aa11.25□□□□□ -0.61
PTPN7-212ENST00000480836 C5orf49A4QMS7 147 aa11.25□□□□□ -0.61
PTPN7-212ENST00000480836 TRAPPC2LH3BP13 241 aa11.25□□□□□ -0.61
PTPN7-212ENST00000480836 ANGPT2O15123 496 aa11.25□□□□□ -0.61
PTPN7-212ENST00000480836 ZNF26P17031 533 aaPredicted RBP11.25□□□□□ -0.61
PTPN7-212ENST00000480836 PCMT1P22061 227 aa11.25□□□□□ -0.61
PTPN7-212ENST00000480836 LSP1P33241 339 aa11.25□□□□□ -0.61
PTPN7-212ENST00000480836 ZNF81P51508 661 aa11.25□□□□□ -0.61
PTPN7-212ENST00000480836 SEC61A1P61619 476 aaKnown RBP11.25□□□□□ -0.61
PTPN7-212ENST00000480836 ENDOGQ14249 297 aaKnown RBP11.25□□□□□ -0.61
PTPN7-212ENST00000480836 PCGF3Q3KNV8 242 aa11.25□□□□□ -0.61
PTPN7-212ENST00000480836 FAM27BQ5VT28 67 aa11.25□□□□□ -0.61
PTPN7-212ENST00000480836 REP15Q6BDI9 236 aa11.25□□□□□ -0.61
PTPN7-212ENST00000480836 C1QL2Q7Z5L3 287 aa11.25□□□□□ -0.61
PTPN7-212ENST00000480836 BCL6BQ8N143 479 aaPredicted RBP11.25□□□□□ -0.61
PTPN7-212ENST00000480836 TMEM239Q8WW34 195 aa11.25□□□□□ -0.61
PTPN7-212ENST00000480836 C1orf147Q96MC9 270 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms