RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	MST1L	Q2TV78	715 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	FAM205BP	Q63HN1	556 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	SHISA2	Q6UWI4	295 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	OR9K2	Q8NGE7	335 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	MOGAT1	Q96PD6	335 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	DGCR6L	Q9BY27	220 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	DCLRE1B	Q9H816	532 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	C20orf141	Q9NUB4	165 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	KIF17	Q9P2E2	1029 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	ING1	Q9UK53	422 aa	Predicted RBP	13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	HIF3A	Q9Y2N7	669 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	ATP23	Q9Y6H3	246 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	VWF	P04275	2813 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	LRP5L	A4QPB2	252 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	NPIPB13	A6NJU9	1138 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	NPIPB4	C9JG80	1138 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	MRPL33	O75394	65 aa	Known RBP	13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	DAP3	P51398	398 aa	Known RBP	13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	SEC23B	Q15437	767 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	CARTPT	Q16568	116 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	AWAT1	Q58HT5	328 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	CD300LD	Q6UXZ3	194 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	SLC46A3	Q7Z3Q1	461 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	ZER1	Q7Z7L7	766 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	PEG10	Q86TG7	708 aa	Known RBP	13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	ATG16L2	Q8NAA4	619 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	AQP11	Q8NBQ7	271 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	OR52N5	Q8NH56	324 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	LRTOMT	Q8WZ04	291 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	TMEM45B	Q96B21	275 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	FAM46A	Q96IP4	442 aa	Known RBP	13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	JMJD8	Q96S16	334 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	C8orf4	Q9NR00	106 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	INIP	Q9NRY2	104 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	PCDHB10	Q9UN67	800 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	RCE1	Q9Y256	329 aa		13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	NOSIP	Q9Y314	301 aa	Known RBP	13.5	□□□□□ -0.25
HDLBP-238	ENST00000479894	IGHV3-15	A0A0B4J1V0	119 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	ZNF726	A6NNF4	738 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	CENPBD1	B2RD01	187 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894		M0R1B8	84 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	NDUFB2	O95178	105 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	BAG2	O95816	211 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	CDH2	P19022	906 aa	Predicted RBP	13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	MAK	P20794	623 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	CBL	P22681	906 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	APEX1	P27695	318 aa	Known RBP	13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	RPL4	P36578	427 aa	Known RBP	13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	GPR4	P46093	362 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	GSS	P48637	474 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	SNRPD2	P62316	118 aa	Known RBP	13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	ALG10	Q5BKT4	473 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	C1QTNF12	Q5T7M4	302 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	PGBD2	Q6P3X8	592 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	SMARCD3	Q6STE5	483 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	CREB3L2	Q70SY1	520 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	CCDC103	Q8IW40	242 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	ZNF100	Q8IYN0	542 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	PQLC1	Q8N2U9	271 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	CLDN22	Q8N7P3	220 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	OR52L1	Q8NGH7	329 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	FNDC8	Q8TC99	324 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	APH1A	Q96BI3	265 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	FEV	Q99581	238 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894	ORC6	Q9Y5N6	252 aa		13.49	□□□□□ -0.25
HDLBP-238	ENST00000479894		A6NIZ1	184 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	ZNF716	A6NP11	495 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	ANKRD65	E5RJM6	399 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	MS4A18	H0YCH9	400 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894		H3BNX3	289 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	IDH3B	O43837	385 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	PIP5K1C	O60331	668 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	LILRA1	O75019	489 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	RAD51D	O75771	328 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	BCL10	O95999	233 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	TSPAN19	P0C672	248 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	SLC6A6	P31641	620 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	IL2RG	P31785	369 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	P2RY4	P51582	365 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	RAP1B	P61224	184 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	RAP1A	P62834	184 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	ELF3	P78545	371 aa	Predicted RBP	13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	RPL18	Q07020	188 aa	Known RBP	13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	MS4A18	Q3C1V0	323 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	MIDN	Q504T8	468 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	FBXW9	Q5XUX1	488 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	GPR139	Q6DWJ6	353 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	OR7E24	Q6IFN5	339 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	TREML4	Q6UXN2	200 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	DPY19L2P2	Q6ZN68	376 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	RASSF6	Q6ZTQ3	369 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	AAED1	Q7RTV5	226 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	LSR	Q86X29	649 aa	Predicted RBP	13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	POMGNT2	Q8NAT1	580 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	OR51A7	Q8NH64	312 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	FBXO17	Q96EF6	278 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	DNAJA3	Q96EY1	480 aa		13.48	□□□□□ -0.25
HDLBP-238	ENST00000479894	RBM4B	Q9BQ04	359 aa	Known RBP	13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms