RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 TMED7-TICAM2A0A0A6YYA0 188 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 BLACEA4D250 179 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 LMX1BO60663 402 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 APEHP13798 732 aaKnown RBP9.73□□□□□ -0.85
VPS52-217ENST00000478934 CSRP1P21291 193 aaKnown RBP9.73□□□□□ -0.85
VPS52-217ENST00000478934 HSD11B2P80365 405 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 ELAVL1Q15717 326 aaKnown RBP9.73□□□□□ -0.85
VPS52-217ENST00000478934 TMEM205Q6UW68 189 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 SLC25A45Q8N413 288 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 SLC38A9Q8NBW4 561 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 OTOSQ8NHW6 89 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 ZNF417Q8TAU3 575 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 MIB2Q96AX9 1013 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 C4orf45Q96LM5 186 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 ZNF587Q96SQ5 575 aaPredicted RBP9.73□□□□□ -0.85
VPS52-217ENST00000478934 CHST6Q9GZX3 395 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 ZNF304Q9HCX3 659 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 UBQLN2Q9UHD9 624 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 TMED7Q9Y3B3 224 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 TNRC18O15417 2968 aaPredicted RBP9.73□□□□□ -0.85
VPS52-217ENST00000478934 XKRYO14609 159 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 ARPC5O15511 151 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 SLC25A12O75746 678 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 FBLP22087 321 aaKnown RBP9.73□□□□□ -0.85
VPS52-217ENST00000478934 BIKQ13323 160 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 ALKAL2Q6UX46 152 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 GLDNQ6ZMI3 551 aaPredicted RBP9.73□□□□□ -0.85
VPS52-217ENST00000478934 LINC00346Q8IVM7 164 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 OR4C16Q8NGL9 310 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 ANGPTL6Q8NI99 470 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 MRPL48Q96GC5 212 aaKnown RBP9.73□□□□□ -0.85
VPS52-217ENST00000478934 ARL5BQ96KC2 179 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 SFXN2Q96NB2 322 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 SLITRK2Q9H156 845 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 SLC22A11Q9NSA0 550 aa9.73□□□□□ -0.85
VPS52-217ENST00000478934 ATXN7L1Q9ULK2 861 aaPredicted RBP9.73□□□□□ -0.85
VPS52-217ENST00000478934 COA3Q9Y2R0 106 aaPredicted RBP9.73□□□□□ -0.85
VPS52-217ENST00000478934 TRAV36DV7A0A075B6V5 113 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 TRAV18A0A075B6X5 111 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 TRBV5-7A0A0A0MS05 114 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 IGKV1D-43A0A0B4J1Z2 117 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 PRSS37A4D1T9 235 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 LINC00862A6NCI5 91 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 GP1BBP13224 206 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 AP2S1P53680 142 aaPredicted RBP9.72□□□□□ -0.85
VPS52-217ENST00000478934 FBXW4P57775 412 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 ADAM8P78325 824 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 OPCMLQ14982 345 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 FAM69AQ5T7M9 428 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 METTL11BQ5VVY1 283 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 DCAF12L2Q5VW00 463 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 OR10K2Q6IF99 312 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 CORO6Q6QEF8 472 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 ACTR6Q9GZN1 396 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 PLEKHA1Q9HB21 404 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 NPDC1Q9NQX5 325 aaPredicted RBP9.72□□□□□ -0.85
VPS52-217ENST00000478934 SLC2A4RGQ9NR83 387 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 ALG1L2C9J202 215 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 SOX1O00570 391 aaPredicted RBP9.72□□□□□ -0.85
VPS52-217ENST00000478934 ADAM10O14672 748 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 ZNF217O75362 1048 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 ZNF254O75437 659 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 PIAS2O75928 621 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 GLSO94925 669 aaPredicted RBP9.72□□□□□ -0.85
VPS52-217ENST00000478934 TIAF1O95411 115 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 IFNA7P01567 189 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 GALNSP34059 522 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 POU3F4P49335 361 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 H2BFSP57053 126 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 NXPH1P58417 271 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 FOXK1P85037 733 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 SLC17A1Q14916 467 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 AANATQ16613 207 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 C1orf140Q5VVS0 124 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 B3GNTL1Q67FW5 361 aaPredicted RBP9.72□□□□□ -0.85
VPS52-217ENST00000478934 SEZ6L2Q6UXD5 910 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 BAIAP2L2Q6UXY1 529 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 KCTD20Q7Z5Y7 419 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 CDH24Q86UP0 819 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 OR51A2Q8NGJ7 313 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 OR51S1Q8NGJ8 323 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 GPR148Q8TDV2 347 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 CXorf58Q96LI9 332 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 DCBLD2Q96PD2 775 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 C7orf50Q9BRJ6 194 aaKnown RBP9.72□□□□□ -0.85
VPS52-217ENST00000478934 PELOQ9BRX2 385 aaKnown RBP9.72□□□□□ -0.85
VPS52-217ENST00000478934 COMMD4Q9H0A8 199 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 CGGBP1Q9UFW8 167 aaPredicted RBP9.72□□□□□ -0.85
VPS52-217ENST00000478934 VDAC3Q9Y277 283 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 SPEF1Q9Y4P9 236 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 MMACHCQ9Y4U1 282 aa9.72□□□□□ -0.85
VPS52-217ENST00000478934 FXYD6-FXYD2A0A087WZ82 144 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 A0A1B0GUH1 482 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 CREBL2O60519 120 aaPredicted RBP9.71□□□□□ -0.85
VPS52-217ENST00000478934 OR6A2O95222 327 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 ECDO95905 644 aaPredicted RBP9.71□□□□□ -0.85
VPS52-217ENST00000478934 TGM6O95932 706 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 LIPCP11150 499 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 RPL27P61353 136 aaKnown RBP9.71□□□□□ -0.85
VPS52-217ENST00000478934 HNRNPKP61978 463 aaKnown RBP eCLIP9.71□□□□□ -0.854e-9■■□□□ 12.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms