RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 ARIH2OSQ8N7S6 290 aa20.15■□□□□ 0.82
C9orf3-215ENST00000478473 ZNF540Q8NDQ6 660 aa20.15■□□□□ 0.82
C9orf3-215ENST00000478473 OR13C2Q8NGS9 318 aa20.15■□□□□ 0.82
C9orf3-215ENST00000478473 LRRC37BQ96QE4 947 aa20.15■□□□□ 0.82
C9orf3-215ENST00000478473 TSPAN32Q96QS1 320 aa20.15■□□□□ 0.82
C9orf3-215ENST00000478473 RBP7Q96R05 134 aa20.15■□□□□ 0.82
C9orf3-215ENST00000478473 MS4A5Q9H3V2 200 aa20.15■□□□□ 0.82
C9orf3-215ENST00000478473 ADA2Q9NZK5 511 aa20.15■□□□□ 0.82
C9orf3-215ENST00000478473 PTP4A3O75365 173 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 CD14P08571 375 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 GYS2P54840 703 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 FMODQ06828 376 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 CD47Q08722 323 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 ZBED5Q49AG3 693 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 PODNL1Q6PEZ8 512 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 FAM122BQ7Z309 247 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 PRIMA1Q86XR5 153 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 ZNF786Q8N393 782 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 FAM86B1Q8N7N1 296 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 OR1J2Q8NGS2 313 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 GPX7Q96SL4 187 aaPredicted RBP20.14■□□□□ 0.81
C9orf3-215ENST00000478473 PIMREGQ9BSJ6 248 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 TAGLN3Q9UI15 199 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 MAGEL2Q9UJ55 1249 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 RTTNQ86VV8 2226 aa20.14■□□□□ 0.81
C9orf3-215ENST00000478473 CHD3Q12873 2000 aaKnown RBP20.14■□□□□ 0.81
C9orf3-215ENST00000478473 IGLV3-9A0A075B6K5 115 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 M0R233 179 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 DCTN3O75935 186 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 STAMBPO95630 424 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 ERCC1P07992 297 aaPredicted RBP20.13■□□□□ 0.81
C9orf3-215ENST00000478473 OMPP47874 163 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 PLP2Q04941 152 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 SAMD4BQ5PRF9 694 aaKnown RBP20.13■□□□□ 0.81
C9orf3-215ENST00000478473 C6orf52Q5T4I8 152 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 RRM2BQ7LG56 351 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 MEX3DQ86XN8 651 aaKnown RBP20.13■□□□□ 0.81
C9orf3-215ENST00000478473 HIPK1Q86Z02 1210 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 PAQR4Q8N4S7 273 aaPredicted RBP20.13■□□□□ 0.81
C9orf3-215ENST00000478473 RNF148Q8N7C7 305 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 FOXN4Q96NZ1 517 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 WACQ9BTA9 647 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 RNF121Q9H920 327 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 ARL8BQ9NVJ2 186 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 TMEM160Q9NX00 188 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 SIGLEC7Q9Y286 467 aa20.13■□□□□ 0.81
C9orf3-215ENST00000478473 FAM32AQ9Y421 112 aaKnown RBP20.13■□□□□ 0.81
C9orf3-215ENST00000478473 IQCMA0A1B0GVH7 501 aa20.12■□□□□ 0.81
C9orf3-215ENST00000478473 ICMTO60725 284 aa20.12■□□□□ 0.81
C9orf3-215ENST00000478473 GMNNO75496 209 aa20.12■□□□□ 0.81
C9orf3-215ENST00000478473 ADRA2AP08913 450 aa20.12■□□□□ 0.81
C9orf3-215ENST00000478473 ZNF250P15622 560 aa20.12■□□□□ 0.81
C9orf3-215ENST00000478473 CDAP32320 146 aa20.12■□□□□ 0.81
C9orf3-215ENST00000478473 GPR4P46093 362 aa20.12■□□□□ 0.81
C9orf3-215ENST00000478473 TOP3AQ13472 1001 aaPredicted RBP20.12■□□□□ 0.81
C9orf3-215ENST00000478473 TBC1D28Q2M2D7 210 aa20.12■□□□□ 0.81
C9orf3-215ENST00000478473 GKAP1Q5VSY0 366 aaPredicted RBP20.12■□□□□ 0.81
C9orf3-215ENST00000478473 IGFN1Q86VF2 1251 aa20.12■□□□□ 0.81
C9orf3-215ENST00000478473 ZCCHC24Q8N2G6 241 aaKnown RBP20.12■□□□□ 0.81
C9orf3-215ENST00000478473 CPEB3Q8NE35 698 aaKnown RBP20.12■□□□□ 0.81
C9orf3-215ENST00000478473 PYURFQ96I23 114 aa20.12■□□□□ 0.81
C9orf3-215ENST00000478473 DYNLRB1Q9NP97 96 aa20.12■□□□□ 0.81
C9orf3-215ENST00000478473 REV1Q9UBZ9 1251 aa20.12■□□□□ 0.81
C9orf3-215ENST00000478473 ADAM21Q9UKJ8 722 aa20.12■□□□□ 0.81
C9orf3-215ENST00000478473 A8MV72 311 aaPredicted RBP20.11■□□□□ 0.81
C9orf3-215ENST00000478473 CST2P09228 141 aa20.11■□□□□ 0.81
C9orf3-215ENST00000478473 DAOP14920 347 aa20.11■□□□□ 0.81
C9orf3-215ENST00000478473 ZNF32P17041 273 aa20.11■□□□□ 0.81
C9orf3-215ENST00000478473 ITGA2P17301 1181 aa20.11■□□□□ 0.81
C9orf3-215ENST00000478473 PABPC1L2AQ5JQF8 200 aa20.11■□□□□ 0.81
C9orf3-215ENST00000478473 SYT9Q86SS6 491 aa20.11■□□□□ 0.81
C9orf3-215ENST00000478473 LRRC18Q8N456 261 aa20.11■□□□□ 0.81
C9orf3-215ENST00000478473 CLDN22Q8N7P3 220 aa20.11■□□□□ 0.81
C9orf3-215ENST00000478473 BCL2L14Q9BZR8 327 aa20.11■□□□□ 0.81
C9orf3-215ENST00000478473 LRMDAQ9H2I8 198 aa20.11■□□□□ 0.81
C9orf3-215ENST00000478473 KCNN2Q9H2S1 579 aa20.11■□□□□ 0.81
C9orf3-215ENST00000478473 NRIP3Q9NQ35 241 aa20.11■□□□□ 0.81
C9orf3-215ENST00000478473 NDE1Q9NXR1 346 aa20.11■□□□□ 0.81
C9orf3-215ENST00000478473 IGHV4-31P0DP07 118 aa20.1■□□□□ 0.81
C9orf3-215ENST00000478473 RAD52P43351 418 aa20.1■□□□□ 0.81
C9orf3-215ENST00000478473 UCP2P55851 309 aa20.1■□□□□ 0.81
C9orf3-215ENST00000478473 RIN1Q13671 783 aa20.1■□□□□ 0.81
C9orf3-215ENST00000478473 KRT72Q14CN4 511 aa20.1■□□□□ 0.81
C9orf3-215ENST00000478473 LRP11Q86VZ4 500 aa20.1■□□□□ 0.81
C9orf3-215ENST00000478473 NSMAFQ92636 917 aa20.1■□□□□ 0.81
C9orf3-215ENST00000478473 POM121L2Q96KW2 1035 aa20.1■□□□□ 0.81
C9orf3-215ENST00000478473 CDRT15Q96T59 188 aa20.1■□□□□ 0.81
C9orf3-215ENST00000478473 CDH20Q9HBT6 801 aa20.1■□□□□ 0.81
C9orf3-215ENST00000478473 YAE1D1Q9NRH1 226 aa20.1■□□□□ 0.81
C9orf3-215ENST00000478473 TRBV4-1A0A0J9YWV2 114 aa20.09■□□□□ 0.81
C9orf3-215ENST00000478473 SH3PXD2BA1X283 911 aa20.09■□□□□ 0.81
C9orf3-215ENST00000478473 NDUFB2O95178 105 aa20.09■□□□□ 0.81
C9orf3-215ENST00000478473 TACSTD2P09758 323 aa20.09■□□□□ 0.81
C9orf3-215ENST00000478473 APEX1P27695 318 aaKnown RBP20.09■□□□□ 0.81
C9orf3-215ENST00000478473 GZMKP49863 264 aa20.09■□□□□ 0.81
C9orf3-215ENST00000478473 FXYD6P3P58550 94 aa20.09■□□□□ 0.81
C9orf3-215ENST00000478473 ERVK-25P63136 954 aa20.09■□□□□ 0.81
C9orf3-215ENST00000478473 PSG4Q00888 419 aa20.09■□□□□ 0.81
C9orf3-215ENST00000478473 SEC23BQ15437 767 aa20.09■□□□□ 0.81
C9orf3-215ENST00000478473 MESTQ5EB52 335 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms