RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 RNF128Q8TEB7 428 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 THEM6Q8WUY1 208 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 ZNRF4Q8WWF5 429 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 PSMF1Q92530 271 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 RNF31Q96EP0 1072 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 DIRAS2Q96HU8 199 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 THOC3Q96J01 351 aaKnown RBP7.1□□□□□ -1.27
VMA21-203ENST00000477649 TSSK2Q96PF2 358 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 ATF6BQ99941 703 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 UTP23Q9BRU9 249 aaKnown RBP7.1□□□□□ -1.27
VMA21-203ENST00000477649 WACQ9BTA9 647 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 RNF32Q9H0A6 362 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 RERGLQ9H628 205 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 MOB1AQ9H8S9 216 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 PROK2Q9HC23 129 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 ABCB9Q9NP78 766 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 PAQR5Q9NXK6 330 aaPredicted RBP7.1□□□□□ -1.27
VMA21-203ENST00000477649 QPCTLQ9NXS2 382 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 STMN3Q9NZ72 180 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 B3GAT1Q9P2W7 334 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 DCHS1Q96JQ0 3298 aa7.1□□□□□ -1.27
VMA21-203ENST00000477649 VPS13AQ96RL7 3174 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 OR2M5A3KFT3 312 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 TVP23AA6NH52 213 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 ACOD1A6NK06 481 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 OR4C45A6NMZ5 311 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 FAM171A2A8MVW0 826 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 H7C1C5 153 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 TBX1O43435 398 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 TRAF3IP2O43734 574 aaPredicted RBP7.09□□□□□ -1.27
VMA21-203ENST00000477649 PFDN1O60925 122 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 ZFPL1O95159 310 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 ISG15P05161 165 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 CD2P06729 351 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 SPARCP09486 303 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 CLEC2LP0C7M8 214 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 PGA4P0DJD7 388 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 PGA3P0DJD8 388 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 OR8G3PP0DMU2 310 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 SRMP19623 302 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 NPR2P20594 1047 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 TGM1P22735 817 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 CFPP27918 469 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 LAP3P28838 519 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 SHC1P29353 583 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 NBL1P41271 181 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 NR4A2P43354 598 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 EVX1P49640 407 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 ZNF133P52736 654 aaPredicted RBP7.09□□□□□ -1.27
VMA21-203ENST00000477649 HCCSP53701 268 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 BIDP55957 195 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 RPS18P62269 152 aaKnown RBP7.09□□□□□ -1.27
VMA21-203ENST00000477649 RPS11P62280 158 aaKnown RBP eCLIP7.09□□□□□ -1.27
VMA21-203ENST00000477649 LSM6P62312 80 aaKnown RBP7.09□□□□□ -1.27
VMA21-203ENST00000477649 LCN6P62502 163 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 PITPNAQ00169 270 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 OC90Q02509 493 aaPredicted RBP7.09□□□□□ -1.27
VMA21-203ENST00000477649 Q0VFX4 171 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 CAMK2BQ13554 666 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 EIF2B1Q14232 305 aaKnown RBP7.09□□□□□ -1.27
VMA21-203ENST00000477649 MELKQ14680 651 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 HIST3H3Q16695 136 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 MEP1BQ16820 701 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 SFXN4Q6P4A7 337 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 FAM131AQ6UXB0 335 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 KRT77Q7Z794 578 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 DTX1Q86Y01 620 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 LAX1Q8IWV1 398 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 BEST3Q8N1M1 668 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 GHDCQ8N2G8 530 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 IL22RA1Q8N6P7 574 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 ZNF676Q8N7Q3 588 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 OR2G2Q8NGZ5 317 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 ADAMTS14Q8WXS8 1223 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 NKD1Q969G9 470 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 MAP6Q96JE9 813 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 C4orf45Q96LM5 186 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 GNRHR2Q96P88 292 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 DERL3Q96Q80 235 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 SOSTQ9BQB4 213 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 SRRQ9GZT4 340 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 C1orf198Q9H425 327 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 ELOVL3Q9HB03 270 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 TCF7L1Q9HCS4 588 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 ABCB10Q9NRK6 738 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 MRPL22Q9NWU5 206 aaKnown RBP7.09□□□□□ -1.27
VMA21-203ENST00000477649 LRFN1Q9P244 771 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 RCE1Q9Y256 329 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 COA3Q9Y2R0 106 aaPredicted RBP7.09□□□□□ -1.27
VMA21-203ENST00000477649 KLF13Q9Y2Y9 288 aaPredicted RBP7.09□□□□□ -1.27
VMA21-203ENST00000477649 R4GMQ9 66 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 V9GYH0 126 aa7.09□□□□□ -1.27
VMA21-203ENST00000477649 LOC101059948A0A1B0GTJ6 334 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 A0A1W2PNU3 283 aaPredicted RBP7.08□□□□□ -1.28
VMA21-203ENST00000477649 MEGF11A6BM72 1044 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 TRABD2BA6NFA1 517 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 CDRT15L2A8MXV6 281 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 NPIPA2E9PIF3 369 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 NPIPA3F8WFD2 350 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 WISP1O95388 367 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms