RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 CDH20Q9HBT6 801 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 MRPL39Q9NYK5 338 aaKnown RBP6.24□□□□□ -1.41
BRCA1-214ENST00000477152 ANGPT4Q9Y264 503 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.24□□□□□ -1.412e-7■■■■■ 43.6
BRCA1-214ENST00000477152 FBN1P35555 2871 aaKnown RBP6.24□□□□□ -1.41
BRCA1-214ENST00000477152 A0A087WUJ7 227 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 IQCMA0A1B0GVH7 501 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 A0A1B0GWA3 101 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 GMNCA6NCL1 334 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 PPIHO43447 177 aaKnown RBP6.24□□□□□ -1.41
BRCA1-214ENST00000477152 TGDSO95455 350 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 MSMBP08118 114 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 OR8G3PP0DMU2 310 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 PRG2P13727 222 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 DRD4P21917 467 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 ZNF84P51523 738 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 CDK6Q00534 326 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 SLC3A1Q07837 685 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 TBC1D28Q2M2D7 210 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 SLC36A2Q495M3 483 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 CARD17Q5XLA6 110 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 TTC33Q6PID6 262 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-214ENST00000477152 RINLQ6ZS11 566 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 KDM8Q8N371 416 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 OR14K1Q8NGZ2 314 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 SGMS2Q8NHU3 365 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 RASSF5Q8WWW0 418 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 TAAR8Q969N4 342 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 MAELQ96JY0 434 aaKnown RBP6.24□□□□□ -1.41
BRCA1-214ENST00000477152 PTDSS2Q9BVG9 487 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 BCL2L14Q9BZR8 327 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 NELFAQ9H3P2 528 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 DECR2Q9NUI1 292 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 TMEM120BA0PK00 339 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 J3QLI3 93 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 TPD52L2O43399 206 aaKnown RBP6.23□□□□□ -1.41
BRCA1-214ENST00000477152 FMO6PO60774 539 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 SNNO75324 88 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-214ENST00000477152 ERLIN1O75477 346 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 TUSC2O75896 110 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 TOX4O94842 621 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 BCL10O95999 233 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 SERPINA5P05154 406 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 ITGA2P17301 1181 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 RHCEP18577 417 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 GATA3P23771 443 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 GUCA1AP43080 201 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-214ENST00000477152 MVDP53602 400 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 KLF3P57682 345 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-214ENST00000477152 EGR4Q05215 589 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 PIGFQ07326 219 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 LGALS3BPQ08380 585 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 OR1Q1Q15612 314 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 NRN1LQ496H8 165 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 ACSM5Q6NUN0 579 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 ZNF613Q6PF04 617 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 LINGO2Q7L985 606 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 PEG10Q86TG7 708 aaKnown RBP6.23□□□□□ -1.41
BRCA1-214ENST00000477152 ARMC8Q8IUR7 673 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 CDK20Q8IZL9 346 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 TMEM123Q8N131 208 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 C3orf56Q8N813 242 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 OR5J2Q8NH18 312 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 SLC26A7Q8TE54 656 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 GCDHQ92947 438 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-214ENST00000477152 ZNF566Q969W8 418 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 SLC41A3Q96GZ6 507 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 SUCNR1Q9BXA5 334 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 TPK1Q9H3S4 243 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 TMEM38AQ9H6F2 299 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 METTL17Q9H7H0 456 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-214ENST00000477152 HIF1ANQ9NWT6 349 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 B3GNT2Q9NY97 397 aa6.23□□□□□ -1.41
BRCA1-214ENST00000477152 EIF3KQ9UBQ5 218 aaKnown RBP6.23□□□□□ -1.41
BRCA1-214ENST00000477152 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-214ENST00000477152 TMEM129A0AVI4 362 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 CENPBD1B2RD01 187 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 TRAF3IP2O43734 574 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-214ENST00000477152 PNPP00491 289 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 HLA-HP01893 362 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 ADORA3P0DMS8 318 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 MED14OSP0DP75 135 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 ZNF35P13682 527 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 ZNF14P17017 642 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-214ENST00000477152 CBLP22681 906 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 IFNA8P32881 189 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 APLNRP35414 380 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 LIPAP38571 399 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 MRPL19P49406 292 aaKnown RBP6.22□□□□□ -1.41
BRCA1-214ENST00000477152 RUNX1T1Q06455 604 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 RBBP4Q09028 425 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 CCNIQ14094 377 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 SCARB2Q14108 478 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 MAPK11Q15759 364 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 ZMAT1Q5H9K5 638 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 INTS11Q5TA45 600 aaKnown RBP6.22□□□□□ -1.41
BRCA1-214ENST00000477152 USP43Q70EL4 1123 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 OR6X1Q8NH79 312 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 NFKBIDQ8NI38 313 aa6.22□□□□□ -1.41
BRCA1-214ENST00000477152 ZNF519Q8TB69 540 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms