RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 LRRC18Q8N456 261 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 RBM15BQ8NDT2 890 aaKnown RBP9.26□□□□□ -0.93
SEC13-214ENST00000476597 CPEB3Q8NE35 698 aaKnown RBP9.26□□□□□ -0.93
SEC13-214ENST00000476597 OR1J2Q8NGS2 313 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 HPS1Q92902 700 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 NABP1Q96AH0 204 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 RBP7Q96R05 134 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 SOX7Q9BT81 388 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 ALG12Q9BV10 488 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 FNDC11Q9BVV2 318 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 SHARPINQ9H0F6 387 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 LRMDAQ9H2I8 198 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 KCNN2Q9H2S1 579 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 CDH20Q9HBT6 801 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 RHCGQ9UBD6 479 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 UGT2A1Q9Y4X1 527 aa9.26□□□□□ -0.93
SEC13-214ENST00000476597 IGLV3-9A0A075B6K5 115 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 A0A087WUU8 490 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 NDUFAB1O14561 156 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 PRSS23O95084 383 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 ZNF682O95780 498 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 CLPTM1O96005 669 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 HPXP02790 462 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 FAM157BP0CG42 384 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 NR2C1P13056 603 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 ZNF32P17041 273 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 IL2RGP31785 369 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 THBS2P35442 1172 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 GSK3BP49841 420 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 SELENOVP59797 346 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 CTXN1P60606 82 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 FMODQ06828 376 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 SGCAQ16586 387 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 TBC1D28Q2M2D7 210 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 IFI44LQ53G44 452 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 PABPC1L2AQ5JQF8 200 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 FAM120AOSQ5T036 256 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 FAM27BQ5VT28 67 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 TBPL2Q6SJ96 375 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 TMPRSS11FQ6ZWK6 438 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 MBOAT2Q6ZWT7 520 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 FKBP9P1Q75LS8 142 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 TSEN54Q7Z6J9 526 aaKnown RBP9.25□□□□□ -0.93
SEC13-214ENST00000476597 OR51A7Q8NH64 312 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 ZNF519Q8TB69 540 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 SYNPRQ8TBG9 265 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 FNDC8Q8TC99 324 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 GEMIN6Q8WXD5 167 aaKnown RBP9.25□□□□□ -0.93
SEC13-214ENST00000476597 ACOT11Q8WXI4 607 aaPredicted RBP9.25□□□□□ -0.93
SEC13-214ENST00000476597 C11orf40Q8WZ69 217 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 NSMAFQ92636 917 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 RDH5Q92781 318 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 C1orf159Q96HA4 380 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 HSH2DQ96JZ2 352 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 BCL2L14Q9BZR8 327 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 MYLK2Q9H1R3 596 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 CHODLQ9H9P2 273 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 TAAR3PQ9P1P4 343 aa9.25□□□□□ -0.93
SEC13-214ENST00000476597 CHD3Q12873 2000 aaKnown RBP9.25□□□□□ -0.93
SEC13-214ENST00000476597 ANK2Q01484 3957 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 TRAV27A0A087WT01 109 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 A0A1W2PPW3 197 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 GMNCA6NCL1 334 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 EFCAB9A8MZ26 197 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 ATP8B1O43520 1251 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 SERPINA1P01009 418 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 LCKP06239 509 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 SAGP10523 405 aaPredicted RBP9.24□□□□□ -0.93
SEC13-214ENST00000476597 NAT2P11245 290 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 ACHEP22303 614 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 APEX1P27695 318 aaKnown RBP9.24□□□□□ -0.93
SEC13-214ENST00000476597 APLNRP35414 380 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 SLC9A3P48764 834 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 TMEM33P57088 247 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 PSME3P61289 254 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 ERVS71-1P61550 626 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 MRPS11P82912 194 aaKnown RBP9.24□□□□□ -0.93
SEC13-214ENST00000476597 PSG4Q00888 419 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 HSF2Q03933 536 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 CD47Q08722 323 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 TOP3AQ13472 1001 aaPredicted RBP9.24□□□□□ -0.93
SEC13-214ENST00000476597 TRIP10Q15642 601 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 FAM205BPQ63HN1 556 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 FOXL2NBQ6ZUU3 175 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 OAFQ86UD1 273 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 IGFN1Q86VF2 1251 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 MEX3DQ86XN8 651 aaKnown RBP9.24□□□□□ -0.93
SEC13-214ENST00000476597 CLDN22Q8N7P3 220 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 LINC01356Q8N9X3 169 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 FAM156AQ8NDB6 213 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 CMTM5Q96DZ9 223 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 POM121L2Q96KW2 1035 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 TSPAN32Q96QS1 320 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 SNX18Q96RF0 628 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 ELAC2Q9BQ52 826 aaKnown RBP9.24□□□□□ -0.93
SEC13-214ENST00000476597 OR51B6Q9H340 312 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 NMNAT1Q9HAN9 279 aaPredicted RBP9.24□□□□□ -0.93
SEC13-214ENST00000476597 CCNB1IP1Q9NPC3 277 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 SLCO1C1Q9NYB5 712 aa9.24□□□□□ -0.93
SEC13-214ENST00000476597 ABCD2Q9UBJ2 740 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms