RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 JMJD1CQ15652 2540 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 TRBV4-1A0A0J9YWV2 114 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 H7C1C5 153 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 ARPC2O15144 300 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 CD5LO43866 347 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 TP53P04637 393 aaPredicted RBP15.44■□□□□ 0.06
UPF3A-203ENST00000474056 NR2C1P13056 603 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 LCN6P62502 163 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 ERVK-25P63136 954 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 LOXL1Q08397 574 aaPredicted RBP15.44■□□□□ 0.06
UPF3A-203ENST00000474056 CARTPTQ16568 116 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 ZBED5Q49AG3 693 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 SAMD4BQ5PRF9 694 aaKnown RBP15.44■□□□□ 0.06
UPF3A-203ENST00000474056 FAM205BPQ63HN1 556 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 LRP11Q86VZ4 500 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 DEFB107AQ8IZN7 70 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 DHRS1Q96LJ7 313 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 RBP7Q96R05 134 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 SYT3Q9BQG1 590 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 RAB1BQ9H0U4 201 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 SIAEQ9HAT2 523 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 DYNLRB1Q9NP97 96 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 FBXO9Q9UK97 447 aaPredicted RBP15.44■□□□□ 0.06
UPF3A-203ENST00000474056 FZR1Q9UM11 496 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 TMEM5Q9Y2B1 443 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 ADAM18Q9Y3Q7 739 aa15.44■□□□□ 0.06
UPF3A-203ENST00000474056 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.43■□□□□ 0.062e-8■■■■□ 23.5
UPF3A-203ENST00000474056 VWC2LB2RUY7 222 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 MGRN1O60291 552 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 ADRA2AP08913 450 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 FAM157BP0CG42 384 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 RPL4P36578 427 aaKnown RBP15.43■□□□□ 0.06
UPF3A-203ENST00000474056 OMPP47874 163 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 LIMS1P48059 325 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 RPS23P62266 143 aaKnown RBP15.43■□□□□ 0.06
UPF3A-203ENST00000474056 MXRA7P84157 204 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 SEC23BQ15437 767 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 SGCAQ16586 387 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 TMEM249Q2WGJ8 235 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 THEM4Q5T1C6 240 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 C16orf89Q6UX73 402 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 OR52J3Q8NH60 311 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 PYURFQ96I23 114 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 CCT8L2Q96SF2 557 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 PIMREGQ9BSJ6 248 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 OR51B6Q9H340 312 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 TPK1Q9H3S4 243 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 CDH20Q9HBT6 801 aa15.43■□□□□ 0.06
UPF3A-203ENST00000474056 MYEF2Q9P2K5 600 aaKnown RBP15.43■□□□□ 0.06
UPF3A-203ENST00000474056 IQCMA0A1B0GVH7 501 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 A6NIZ1 184 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 CD14P08571 375 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 ZNF32P17041 273 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 APEX1P27695 318 aaKnown RBP15.42■□□□□ 0.06
UPF3A-203ENST00000474056 EVX1P49640 407 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 RAP1BP61224 184 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 RAP1AP62834 184 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 HSF2Q03933 536 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 TBC1D28Q2M2D7 210 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 MESTQ5EB52 335 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 PABPC1L2AQ5JQF8 200 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 FOXL2NBQ6ZUU3 175 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 FAM122BQ7Z309 247 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 FITM2Q8N6M3 262 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 ARIH2OSQ8N7S6 290 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 CPEB3Q8NE35 698 aaKnown RBP15.42■□□□□ 0.06
UPF3A-203ENST00000474056 FNDC8Q8TC99 324 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 Q96M85 177 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 NSMCE2Q96MF7 247 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 FUZQ9BT04 418 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 KCNN2Q9H2S1 579 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 C1orf198Q9H425 327 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 MYOZ1Q9NP98 299 aaPredicted RBP15.42■□□□□ 0.06
UPF3A-203ENST00000474056 CCNB1IP1Q9NPC3 277 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 SIGLEC7Q9Y286 467 aa15.42■□□□□ 0.06
UPF3A-203ENST00000474056 A0A1W2PPL8 197 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 M0R233 179 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 NDUFS8O00217 210 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 SYNGR3O43761 229 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 PTP4A3O75365 173 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 SNAP29O95721 258 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 PTHP01270 115 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 USF1P22415 310 aaPredicted RBP15.41■□□□□ 0.06
UPF3A-203ENST00000474056 ALDH3B1P43353 468 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 FXYD6P3P58550 94 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 ERVS71-1P61550 626 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 SPIBQ01892 262 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 PLP2Q04941 152 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 GGTLC2Q14390 218 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 KRT72Q14CN4 511 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 MAD2L1BPQ15013 274 aaPredicted RBP15.41■□□□□ 0.06
UPF3A-203ENST00000474056 RGS7BPQ6MZT1 257 aaPredicted RBP15.41■□□□□ 0.06
UPF3A-203ENST00000474056 THSD4Q6ZMP0 1018 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 NEU4Q8WWR8 484 aaPredicted RBP15.41■□□□□ 0.06
UPF3A-203ENST00000474056 RASD2Q96D21 266 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 RSRC1Q96IZ7 334 aaKnown RBP15.41■□□□□ 0.06
UPF3A-203ENST00000474056 ZNF570Q96NI8 536 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 FOXN4Q96NZ1 517 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 YAE1D1Q9NRH1 226 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 NDE1Q9NXR1 346 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms