RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 CLDN22Q8N7P3 220 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 OR4F15Q8NGB8 312 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 LILRB1Q8NHL6 650 aaPredicted RBP11.97□□□□□ -0.49
USF1-205ENST00000473969 NEUROG1Q92886 237 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 TBC1D23Q9NUY8 699 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 B3GNT2Q9NY97 397 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 LAMP3Q9UQV4 416 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 SPEF1Q9Y4P9 236 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 AP4S1Q9Y587 144 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 DCHS2Q6V1P9 2916 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 TEP1Q99973 2627 aaKnown RBP11.96□□□□□ -0.49
USF1-205ENST00000473969 ARRDC5A6NEK1 342 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 ATP6V1G2-DDX39BF2Z307 99 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 H3BN98 237 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 SLC16A7O60669 478 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 KHDRBS3O75525 346 aaKnown RBP11.96□□□□□ -0.49
USF1-205ENST00000473969 TIPRLO75663 272 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 PATE4P0C8F1 98 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 FCGR1AP12314 374 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 BMP4P12644 408 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 MSR1P21757 451 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 FASP25445 335 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 FXYD6P3P58550 94 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 PCBD1P61457 104 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 GALK2Q01415 458 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 SPOCK1Q08629 439 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 ZNF770Q6IQ21 691 aaPredicted RBP11.96□□□□□ -0.49
USF1-205ENST00000473969 ZNF544Q6NX49 715 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 LEG1Q6P5S2 330 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 OR1J2Q8NGS2 313 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 OR4K13Q8NH42 304 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 TEX47Q8TBZ9 253 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 NMD3Q96D46 503 aaKnown RBP11.96□□□□□ -0.49
USF1-205ENST00000473969 RAB3IPQ96QF0 476 aaPredicted RBP11.96□□□□□ -0.49
USF1-205ENST00000473969 FEVQ99581 238 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 FOXC2Q99958 501 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 DHRS9Q9BPW9 319 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 BDH2Q9BUT1 245 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 TSSK6Q9BXA6 273 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 SYT4Q9H2B2 425 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 C1orf198Q9H425 327 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 EGLN3Q9H6Z9 239 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 IL20Q9NYY1 176 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 KIF17Q9P2E2 1029 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 BAIAP2Q9UQB8 552 aa11.96□□□□□ -0.49
USF1-205ENST00000473969 ALPK2Q86TB3 2170 aa11.96□□□□□ -0.5
USF1-205ENST00000473969 FBN2P35556 2912 aa11.96□□□□□ -0.5
USF1-205ENST00000473969 IGKV1D-43A0A0B4J1Z2 117 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 ZNF503-AS2A6NEH8 195 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 C12orf71A8MTZ7 269 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 SERPINA5P05154 406 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 CELA3BP08861 270 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 ANXA8P13928 327 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 HIST1H1CP16403 213 aaKnown RBP11.95□□□□□ -0.5
USF1-205ENST00000473969 LAP3P28838 519 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 APOBEC3AP31941 199 aaPredicted RBP11.95□□□□□ -0.5
USF1-205ENST00000473969 APLNRP35414 380 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 CDKN2AP42771 156 aaKnown RBP11.95□□□□□ -0.5
USF1-205ENST00000473969 RAB39AQ14964 217 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 SLC35F1Q5T1Q4 408 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 ALDH16A1Q8IZ83 802 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 ATG16L2Q8NAA4 619 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 OR2T33Q8NG76 320 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 OR52E2Q8NGJ4 325 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 HTRA1Q92743 480 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 SLCO4A1Q96BD0 722 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 TRMT61AQ96FX7 289 aaKnown RBP11.95□□□□□ -0.5
USF1-205ENST00000473969 SNX18Q96RF0 628 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 WACQ9BTA9 647 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 SRA1Q9HD15 236 aaKnown RBP11.95□□□□□ -0.5
USF1-205ENST00000473969 ARMC1Q9NVT9 282 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 VSX1Q9NZR4 365 aaPredicted RBP11.95□□□□□ -0.5
USF1-205ENST00000473969 UGT2A1Q9Y4X1 527 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 TIMM10BQ9Y5J6 103 aa11.95□□□□□ -0.5
USF1-205ENST00000473969 SPG11Q96JI7 2443 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 IGHV2OR16-5A0A0B4J2B6 119 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 E7EQL1 145 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 SOX14O95416 240 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 IFNGP01579 166 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 CST2P09228 141 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 ZNF14P17017 642 aaPredicted RBP11.94□□□□□ -0.5
USF1-205ENST00000473969 POU1F1P28069 291 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 TTKP33981 857 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.94□□□□□ -0.5
USF1-205ENST00000473969 CCNIQ14094 377 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 DAG1Q14118 895 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 TBC1D28Q2M2D7 210 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 FAM27BQ5VT28 67 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 VHLLQ6RSH7 139 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 CD300LDQ6UXZ3 194 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 PTCHD4Q6ZW05 846 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 HIPK1Q86Z02 1210 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 GLB1L2Q8IW92 636 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 MUC15Q8N387 334 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 OR5K1Q8NHB7 308 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 NRBF2Q96F24 287 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 NMNAT3Q96T66 252 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 NIPSNAP1Q9BPW8 284 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 TEX12Q9BXU0 123 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 NUAK2Q9H093 628 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms