RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 ING4Q9UNL4 249 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 NEUROG3Q9Y4Z2 214 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 SLC25A15Q9Y619 301 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 WSB1Q9Y6I7 421 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 FRMPD3Q5JV73 1810 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 ARPC4-TTLL3A0A0A6YYG9 625 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 GLYATL1P3A0A0U1RQE8 302 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 MRPS12O15235 138 aaKnown RBP2.43□□□□□ -2.02
BRCA2-202ENST00000470094 EIF3GO75821 320 aaKnown RBP eCLIP2.43□□□□□ -2.02
BRCA2-202ENST00000470094 CHTF8P0CG12 524 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 MYL2P10916 166 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 CPN2P22792 545 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 TUBG1P23258 451 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 CASQ1P31415 396 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 BTCP35070 178 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 RPS10P46783 165 aaKnown RBP2.43□□□□□ -2.02
BRCA2-202ENST00000470094 CX3CR1P49238 355 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 DAOAP59103 153 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 RAB11AP62491 216 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 IRF8Q02556 426 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 ZNF92Q03936 586 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 KIAA0087Q14695 138 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 RAB11BQ15907 218 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 KLHL40Q2TBA0 621 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 PAGE3Q5JUK9 113 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 PLCXD3Q63HM9 321 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 CNIH2Q6PI25 160 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 TMEM135Q86UB9 458 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 MMAAQ8IVH4 418 aaKnown RBP2.43□□□□□ -2.02
BRCA2-202ENST00000470094 TMEM61Q8N0U2 210 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 ZNF786Q8N393 782 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 PNKDQ8N490 385 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 ZADH2Q8N4Q0 377 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 FAM71E2Q8N5Q1 922 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 OR5B3Q8NH48 314 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 CAPSLQ8WWF8 208 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 UCN3Q969E3 161 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 TMEM54Q969K7 222 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 MED8Q96G25 268 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 DUS3LQ96G46 650 aaKnown RBP2.43□□□□□ -2.02
BRCA2-202ENST00000470094 XPO6Q96QU8 1125 aaKnown RBP2.43□□□□□ -2.02
BRCA2-202ENST00000470094 ROGDIQ9GZN7 287 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 CLSTN2Q9H4D0 955 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 NTN4Q9HB63 628 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 TUBG2Q9NRH3 451 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 CCL28Q9NRJ3 127 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 GNPTGQ9UJJ9 305 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 ZNF223Q9UK11 482 aaPredicted RBP2.43□□□□□ -2.02
BRCA2-202ENST00000470094 TMEM94Q12767 1356 aa2.43□□□□□ -2.02
BRCA2-202ENST00000470094 EIF4G1Q04637 1599 aaKnown RBP2.43□□□□□ -2.02
BRCA2-202ENST00000470094 PHF3Q92576 2039 aaKnown RBP2.42□□□□□ -2.02
BRCA2-202ENST00000470094 KCNE1BA0A087WTH5 132 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 IGKV1D-13A0A0B4J2D9 117 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 A6NDX4 124 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 ZNF726A6NNF4 738 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 KRTAP4-16G5E9R7 235 aaPredicted RBP2.42□□□□□ -2.02
BRCA2-202ENST00000470094 TRDMT1O14717 391 aaKnown RBP2.42□□□□□ -2.02
BRCA2-202ENST00000470094 CLIC3O95833 236 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 SERPINA5P05154 406 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 ACSM4P0C7M7 580 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 GKN3PP0CG01 181 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 IGKV1-13P0DP09 117 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 ICAM2P13598 275 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 RORCP51449 518 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 CRISP1P54107 249 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 ACTA2P62736 377 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 ACTG2P63267 376 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 ACTC1P68032 377 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 ACTA1P68133 377 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 ADARB1P78563 741 aaKnown RBP2.42□□□□□ -2.02
BRCA2-202ENST00000470094 IFT88Q13099 833 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 UNC119Q13432 240 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 SF3A2Q15428 464 aaKnown RBP2.42□□□□□ -2.02
BRCA2-202ENST00000470094 NRF1Q16656 503 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 OR52W1Q6IF63 320 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 RALGPS2Q86X27 583 aaPredicted RBP2.42□□□□□ -2.02
BRCA2-202ENST00000470094 CMTM1Q8IZ96 169 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 Q8N9W7 124 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 TTC29Q8NA56 475 aaPredicted RBP2.42□□□□□ -2.02
BRCA2-202ENST00000470094 OR9G4Q8NGQ1 327 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 OR10R2Q8NGX6 335 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 ZNF502Q8TBZ5 544 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 FAM151AQ8WW52 585 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 ZNF707Q96C28 371 aaPredicted RBP2.42□□□□□ -2.02
BRCA2-202ENST00000470094 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 OR11A1Q9GZK7 315 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 BLZF1Q9H2G9 400 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 TDRD3Q9H7E2 651 aaKnown RBP2.42□□□□□ -2.02
BRCA2-202ENST00000470094 UGT1A7Q9HAW7 530 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 UGT1A8Q9HAW9 530 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 PATZ1Q9HBE1 687 aaKnown RBP2.42□□□□□ -2.02
BRCA2-202ENST00000470094 CYTL1Q9NRR1 136 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 HRASLS2Q9NWW9 162 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 UXTQ9UBK9 157 aaPredicted RBP2.42□□□□□ -2.02
BRCA2-202ENST00000470094 MTRF1LQ9UGC7 380 aaKnown RBP2.42□□□□□ -2.02
BRCA2-202ENST00000470094 SLC17A4Q9Y2C5 497 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 PRG3Q9Y2Y8 225 aaPredicted RBP2.42□□□□□ -2.02
BRCA2-202ENST00000470094 ASTN1O14525 1302 aa2.42□□□□□ -2.02
BRCA2-202ENST00000470094 MSH6P52701 1360 aa2.41□□□□□ -2.02
BRCA2-202ENST00000470094 A0A0B4J2A0 478 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms