RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 RACGAP1Q9H0H5 632 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 RNF121Q9H920 327 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 A0A1W2PPW3 197 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 GMNCA6NCL1 334 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 NME4O00746 187 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 RP2O75695 350 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 PRSS23O95084 383 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 CLPTM1O96005 669 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 PTHP01270 115 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 IFNW1P05000 195 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 NAT2P11245 290 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 COX4I1P13073 169 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 IFI30P13284 250 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 TCN1P20061 433 aaPredicted RBP13.95□□□□□ -0.18
COL9A3-208ENST00000469802 MAKP20794 623 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 HNF1AP20823 631 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 CDAP32320 146 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 KLF3P57682 345 aaPredicted RBP13.95□□□□□ -0.18
COL9A3-208ENST00000469802 RPL27P61353 136 aaKnown RBP13.95□□□□□ -0.18
COL9A3-208ENST00000469802 LIPEQ05469 1076 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 CR1LQ2VPA4 569 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 PABPC1L2AQ5JQF8 200 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 FOXL2NBQ6ZUU3 175 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 NRMQ8IXM6 262 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 LRRC18Q8N456 261 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 LINC01356Q8N9X3 169 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 CPEB3Q8NE35 698 aaKnown RBP13.95□□□□□ -0.18
COL9A3-208ENST00000469802 OR1J2Q8NGS2 313 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 ZNF519Q8TB69 540 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 GEMIN6Q8WXD5 167 aaKnown RBP13.95□□□□□ -0.18
COL9A3-208ENST00000469802 RDH5Q92781 318 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 YIPF5Q969M3 257 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 TSPAN32Q96QS1 320 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 BCL2L14Q9BZR8 327 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 DUSP13Q9UII6 198 aa13.95□□□□□ -0.18
COL9A3-208ENST00000469802 IQCMA0A1B0GVH7 501 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 J3KTA2 159 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 CXCR6O00574 342 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 ZNF32P17041 273 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 COL8A2P25067 703 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 IFNA8P32881 189 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 SLC7A2P52569 658 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 UCP2P55851 309 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 PLP2Q04941 152 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 PRKCDQ05655 676 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 CD47Q08722 323 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 TOP3AQ13472 1001 aaPredicted RBP13.94□□□□□ -0.18
COL9A3-208ENST00000469802 TRAM2Q15035 370 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 ANKDD1AQ495B1 522 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 FAM27BQ5VT28 67 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 FAM205BPQ63HN1 556 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 CBLL1Q75N03 491 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 TREML1Q86YW5 311 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 CLDN22Q8N7P3 220 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 FAM156AQ8NDB6 213 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 POM121L2Q96KW2 1035 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 OR51B6Q9H340 312 aa13.94□□□□□ -0.18
COL9A3-208ENST00000469802 TRAV27A0A087WT01 109 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 C17orf100A8MU93 164 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 ICMTO60725 284 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 SAGP10523 405 aaPredicted RBP13.93□□□□□ -0.18
COL9A3-208ENST00000469802 MDH1P40925 334 aaKnown RBP13.93□□□□□ -0.18
COL9A3-208ENST00000469802 RAD52P43351 418 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 MAGEB1P43366 347 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 GPR6P46095 362 aaPredicted RBP13.93□□□□□ -0.18
COL9A3-208ENST00000469802 YAP1P46937 504 aaKnown RBP13.93□□□□□ -0.18
COL9A3-208ENST00000469802 SLC9A3P48764 834 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 GSK3BP49841 420 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 HSF2Q03933 536 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 CCNIQ14094 377 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 NKPD1Q17RQ9 610 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 KRTAP24-1Q3LI83 254 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 IFI44LQ53G44 452 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 THEM4Q5T1C6 240 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 UGT2A3Q6UWM9 527 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 HACD2Q6Y1H2 254 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 TSEN54Q7Z6J9 526 aaKnown RBP13.93□□□□□ -0.18
COL9A3-208ENST00000469802 IGFN1Q86VF2 1251 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 ZNF101Q8IZC7 436 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 SYNPRQ8TBG9 265 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 FNDC8Q8TC99 324 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 ACOT11Q8WXI4 607 aaPredicted RBP13.93□□□□□ -0.18
COL9A3-208ENST00000469802 NSMAFQ92636 917 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 HSH2DQ96JZ2 352 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 HOPXQ9BPY8 73 aaPredicted RBP13.93□□□□□ -0.18
COL9A3-208ENST00000469802 FNDC11Q9BVV2 318 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 LRMDAQ9H2I8 198 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 CCNB1IP1Q9NPC3 277 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 MED4Q9NPJ6 270 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 HINT3Q9NQE9 182 aaKnown RBP13.93□□□□□ -0.18
COL9A3-208ENST00000469802 ZNF275Q9NSD4 429 aaPredicted RBP13.93□□□□□ -0.18
COL9A3-208ENST00000469802 SLCO1C1Q9NYB5 712 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 NKIRAS2Q9NYR9 191 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 TAAR3PQ9P1P4 343 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 RHCGQ9UBD6 479 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 ABCD2Q9UBJ2 740 aa13.93□□□□□ -0.18
COL9A3-208ENST00000469802 ANK2Q01484 3957 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 LOC100509620A0A075B734 347 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 A0A087WUU8 490 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 CCDC22O60826 627 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms