RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 RALGAPA1Q6GYQ0 2036 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 CCDC187A0A096LP49 1063 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 TRABD2BA6NFA1 517 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 TVP23AA6NH52 213 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 GJE1A6NN92 205 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 C4orf47A7E2U8 309 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 FAM171A2A8MVW0 826 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 H7C1C5 153 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 LINC01387J3KSC0 135 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 TERTO14746 1132 aaKnown RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 MAGEB4O15481 346 aaPredicted RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 PLA2G10O15496 165 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 TRAF3IP2O43734 574 aaPredicted RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 GMFGO60234 142 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 GDF9O60383 454 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 SRSF10O75494 262 aaKnown RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 SERPINI2O75830 405 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 IGHG1P01857 330 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 FAM157BP0CG42 384 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 PRKAR1AP10644 381 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 TFPIP10646 304 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 HLA-DOBP13765 273 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 LIFP15018 202 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 ZNF823P16415 610 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 ATF1P18846 271 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 PSMB10P40306 273 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 MMP16P51512 607 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 AGFG1P52594 562 aaKnown RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 RIDAP52758 137 aaKnown RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 OR10A3P58181 314 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 LCN6P62502 163 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 RPS15P62841 145 aaKnown RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 RAC1P63000 192 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 MRPS10P82664 201 aaKnown RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 DBPQ10586 325 aaPredicted RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 IL18Q14116 193 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 TOMM20Q15388 145 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 MEP1BQ16820 701 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 SLC25A35Q3KQZ1 300 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 UBE2NLQ5JXB2 153 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 TMEM164Q5U3C3 297 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 AGAP6Q5VW22 663 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 TRIQKQ629K1 86 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 IL20RBQ6UXL0 311 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 STAC2Q6ZMT1 411 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 GLRX5Q86SX6 157 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 CATSPERDQ86XM0 798 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 RAB43Q86YS6 212 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 NAXDQ8IW45 347 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 UEVLDQ8IX04 471 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 UBQLNLQ8IYU4 475 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 PRSS35Q8N3Z0 413 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 SAMD12Q8N8I0 201 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 NLGN4YQ8NFZ3 816 aaPredicted RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 ST7LQ8TDW4 575 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 THEM6Q8WUY1 208 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 RNF133Q8WVZ7 376 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 HTRA1Q92743 480 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 ATOH1Q92858 354 aaPredicted RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 PMEPA1Q969W9 287 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 INTS12Q96CB8 462 aaKnown RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 C5orf34Q96MH7 638 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 AGAP4Q96P64 663 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 NECAB3Q96P71 396 aaPredicted RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 IP6K3Q96PC2 410 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 NPAS1Q99742 590 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 C7orf50Q9BRJ6 194 aaKnown RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 WACQ9BTA9 647 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 ABHD6Q9BV23 337 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 CDCP1Q9H5V8 836 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 NIPAL2Q9H841 368 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 ELOVL3Q9HB03 270 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 HPF1Q9NWY4 346 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 SLCO1C1Q9NYB5 712 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 EXTL2Q9UBQ6 330 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 CYB5R1Q9UHQ9 305 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 FBXL2Q9UKC9 423 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 IKZF2Q9UKS7 526 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 FOXJ3Q9UPW0 622 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 COA3Q9Y2R0 106 aaPredicted RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 PCDHGA9Q9Y5G4 932 aaKnown RBP6.81□□□□□ -1.32
COL6A3-208ENST00000468792 HRH3Q9Y5N1 445 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 R4GMQ9 66 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 V9GY05 133 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 ALPK2Q86TB3 2170 aa6.81□□□□□ -1.32
COL6A3-208ENST00000468792 CFAP54Q96N23 3096 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 WDFY3Q8IZQ1 3526 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 MEGF11A6BM72 1044 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 ACOD1A6NK06 481 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 FAM25AB3EWG3 89 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 FAM25CB3EWG5 89 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 FAM25GB3EWG6 89 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 TLX3O43711 291 aaPredicted RBP6.8□□□□□ -1.32
COL6A3-208ENST00000468792 ZIC3O60481 467 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 LRP3O75074 770 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 SLC43A1O75387 559 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 PLGP00747 810 aaPredicted RBP6.8□□□□□ -1.32
COL6A3-208ENST00000468792 HLA-DQA2P01906 255 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 EIF4EP06730 217 aaKnown RBP6.8□□□□□ -1.32
COL6A3-208ENST00000468792 JMJD7P0C870 316 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms