RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 TMEM5Q9Y2B1 443 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.73□□□□□ -0.055e-19■■■■■ 32
SSBP1-207ENST00000468267 SH3PXD2BA1X283 911 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 A6NIZ1 184 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 VWC2LB2RUY7 222 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 NDUFS8O00217 210 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 CDC42EP2O14613 210 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 TLX2O43763 284 aaPredicted RBP14.72□□□□□ -0.05
SSBP1-207ENST00000468267 DCTN3O75935 186 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 PTHP01270 115 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 IGFBP1P08833 259 aaPredicted RBP14.72□□□□□ -0.05
SSBP1-207ENST00000468267 ADRA2AP08913 450 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 MMP7P09237 267 aaPredicted RBP14.72□□□□□ -0.05
SSBP1-207ENST00000468267 TCN1P20061 433 aaPredicted RBP14.72□□□□□ -0.05
SSBP1-207ENST00000468267 RAP1BP61224 184 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 RAP1AP62834 184 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 ZBED5Q49AG3 693 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 SAMD4BQ5PRF9 694 aaKnown RBP14.72□□□□□ -0.05
SSBP1-207ENST00000468267 PAQR4Q8N4S7 273 aaPredicted RBP14.72□□□□□ -0.05
SSBP1-207ENST00000468267 CLDN22Q8N7P3 220 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 FNDC8Q8TC99 324 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 NEU4Q8WWR8 484 aaPredicted RBP14.72□□□□□ -0.05
SSBP1-207ENST00000468267 NSMAFQ92636 917 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 NABP1Q96AH0 204 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 CDRT15Q96T59 188 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 KCNN2Q9H2S1 579 aa14.72□□□□□ -0.05
SSBP1-207ENST00000468267 LOC390937A0A1W2PQ73 354 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 SYNGR3O43761 229 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 PTP4A3O75365 173 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 ERCC1P07992 297 aaPredicted RBP14.71□□□□□ -0.05
SSBP1-207ENST00000468267 ZNF26P17031 533 aaPredicted RBP14.71□□□□□ -0.05
SSBP1-207ENST00000468267 USF1P22415 310 aaPredicted RBP14.71□□□□□ -0.05
SSBP1-207ENST00000468267 ERVK-25P63136 954 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 VLDLRP98155 873 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 PLP2Q04941 152 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 SGCAQ16586 387 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 TMEM249Q2WGJ8 235 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 IQCCQ4KMZ1 466 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 ARIH2OSQ8N7S6 290 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 OR1J2Q8NGS2 313 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 PYURFQ96I23 114 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 FAM46AQ96IP4 442 aaKnown RBP14.71□□□□□ -0.05
SSBP1-207ENST00000468267 DHRS1Q96LJ7 313 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 FOXN4Q96NZ1 517 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 PIMREGQ9BSJ6 248 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 DYNLRB1Q9NP97 96 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 MAGEL2Q9UJ55 1249 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 SVEP1Q4LDE5 3571 aa14.71□□□□□ -0.05
SSBP1-207ENST00000468267 TRBV4-1A0A0J9YWV2 114 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 IQCMA0A1B0GVH7 501 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 SLC22A23A1A5C7 686 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 DIRAS1O95057 198 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 SNAP29O95721 258 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 SEMG1P04279 462 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 CD14P08571 375 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 CCL2P13500 99 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 ITGA2P17301 1181 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 MSX2P35548 267 aaPredicted RBP14.7□□□□□ -0.06
SSBP1-207ENST00000468267 RPL4P36578 427 aaKnown RBP14.7□□□□□ -0.06
SSBP1-207ENST00000468267 NR4A2P43354 598 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 CARTPTQ16568 116 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 TBC1D28Q2M2D7 210 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 SPATS1Q496A3 300 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 PABPC1L2AQ5JQF8 200 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 FGD3Q5JSP0 725 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 FAM27BQ5VT28 67 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 LRP11Q86VZ4 500 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 CCT8L2Q96SF2 557 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 SYT3Q9BQG1 590 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 FUZQ9BT04 418 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 LRMDAQ9H2I8 198 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 CDH20Q9HBT6 801 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 CCNB1IP1Q9NPC3 277 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 YAE1D1Q9NRH1 226 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 NDE1Q9NXR1 346 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 REV1Q9UBZ9 1251 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 COL6A5A8TX70 2615 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 MXRA5Q9NR99 2828 aa14.7□□□□□ -0.06
SSBP1-207ENST00000468267 M0R233 179 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 ARPC2O15144 300 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 CRLF1O75462 422 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 DAOP14920 347 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 ZNF32P17041 273 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 APEX1P27695 318 aaKnown RBP14.69□□□□□ -0.06
SSBP1-207ENST00000468267 OMPP47874 163 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 LIMS1P48059 325 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 HSF2Q03933 536 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 KRT72Q14CN4 511 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 SEC23BQ15437 767 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 C16orf89Q6UX73 402 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 FOXL2NBQ6ZUU3 175 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 DEFB107AQ8IZN7 70 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 CPEB3Q8NE35 698 aaKnown RBP14.69□□□□□ -0.06
SSBP1-207ENST00000468267 Q96M85 177 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 NDEL1Q9GZM8 345 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 MS4A5Q9H3V2 200 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 GRHPRQ9UBQ7 328 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 ADAM21Q9UKJ8 722 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 FZR1Q9UM11 496 aa14.69□□□□□ -0.06
SSBP1-207ENST00000468267 SIGLEC7Q9Y286 467 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms