RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 LRRC23Q53EV4 343 aaPredicted RBP20.89■□□□□ 0.93
PTCH1-210ENST00000468211 LIPNQ5VXI9 398 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 ERICH5Q6P6B1 374 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 GLCCI1Q86VQ1 547 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 CLDN22Q8N7P3 220 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 OR1J2Q8NGS2 313 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 C11orf40Q8WZ69 217 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 NSMAFQ92636 917 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 SIAEQ9HAT2 523 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 FGFR1OP2Q9NVK5 253 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 HIF1ANQ9NWT6 349 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 MED31Q9Y3C7 131 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 TCF21O43680 179 aa20.88■□□□□ 0.93
PTCH1-210ENST00000468211 PTHP01270 115 aa20.88■□□□□ 0.93
PTCH1-210ENST00000468211 ZNF32P17041 273 aa20.88■□□□□ 0.93
PTCH1-210ENST00000468211 ITGA2P17301 1181 aa20.88■□□□□ 0.93
PTCH1-210ENST00000468211 KDELR2P33947 212 aa20.88■□□□□ 0.93
PTCH1-210ENST00000468211 WNT5AP41221 380 aa20.88■□□□□ 0.93
PTCH1-210ENST00000468211 RAD52P43351 418 aa20.88■□□□□ 0.93
PTCH1-210ENST00000468211 SLC25A47Q6Q0C1 308 aa20.88■□□□□ 0.93
PTCH1-210ENST00000468211 MEX3DQ86XN8 651 aaKnown RBP20.88■□□□□ 0.93
PTCH1-210ENST00000468211 ZNF101Q8IZC7 436 aa20.88■□□□□ 0.93
PTCH1-210ENST00000468211 TMEM186Q96B77 213 aa20.88■□□□□ 0.93
PTCH1-210ENST00000468211 ZNF416Q9BWM5 594 aa20.88■□□□□ 0.93
PTCH1-210ENST00000468211 BCL2L14Q9BZR8 327 aa20.88■□□□□ 0.93
PTCH1-210ENST00000468211 TXNIPQ9H3M7 391 aa20.88■□□□□ 0.93
PTCH1-210ENST00000468211 A4GNTQ9UNA3 340 aa20.88■□□□□ 0.93
PTCH1-210ENST00000468211 LOC100509620A0A075B734 347 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 FAM220BPB1ANY3 271 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 NPPAP01160 153 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 TFP02787 698 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 MSMBP08118 114 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 THRBP10828 461 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 CCNOP22674 350 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 APLNRP35414 380 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 ARFIP2P53365 341 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 SELENOVP59797 346 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 HSF2Q03933 536 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 TOP3AQ13472 1001 aaPredicted RBP20.87■□□□□ 0.93
PTCH1-210ENST00000468211 SGCAQ16586 387 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 AVPI1Q5T686 147 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 TMEM154Q6P9G4 183 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 HDDC2Q7Z4H3 204 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 OR1J1Q8NGS3 322 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 AKR7LQ8NHP1 331 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 TPD52L3Q96J77 140 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 POM121L2Q96KW2 1035 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 SLCO1C1Q9NYB5 712 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 HIF3AQ9Y2N7 669 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 CACNG2Q9Y698 323 aa20.87■□□□□ 0.93
PTCH1-210ENST00000468211 ARHGAP32A7KAX9 2087 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 NPIPB13A6NJU9 1138 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 BBIP1A8MTZ0 92 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 NPIPB4C9JG80 1138 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 IFNA14P01570 189 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 STOMP27105 288 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 MVKQ03426 396 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 CD47Q08722 323 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 ALG10Q5BKT4 473 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 SPATA46Q5T0L3 261 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 IGFN1Q86VF2 1251 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 SNX33Q8WV41 574 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 LRMDAQ9H2I8 198 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 METTL17Q9H7H0 456 aaPredicted RBP20.86■□□□□ 0.93
PTCH1-210ENST00000468211 SMURF2Q9HAU4 748 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 CCNB1IP1Q9NPC3 277 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 SNX13Q9Y5W8 968 aa20.86■□□□□ 0.93
PTCH1-210ENST00000468211 WNK2Q9Y3S1 2297 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 IGHV3-13P01766 116 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 VIMP08670 466 aaKnown RBP20.85■□□□□ 0.93
PTCH1-210ENST00000468211 TROVE2P10155 538 aaKnown RBP eCLIP20.85■□□□□ 0.93
PTCH1-210ENST00000468211 IFI30P13284 250 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 MAKP20794 623 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 MPV17P39210 176 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 CRYBB2P43320 205 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 YAP1P46937 504 aaKnown RBP20.85■□□□□ 0.93
PTCH1-210ENST00000468211 ERVK-25P63136 954 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 PSG4Q00888 419 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 FHL1Q13642 323 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 TSTQ16762 297 aaKnown RBP20.85■□□□□ 0.93
PTCH1-210ENST00000468211 LRRC75AQ8NAA5 344 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 OR2T12Q8NG77 320 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 BPIFA2Q96DR5 249 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 PRRC1Q96M27 445 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 LRRC37BQ96QE4 947 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 MAN2C1Q9NTJ4 1040 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 NKIRAS2Q9NYR9 191 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 STX18Q9P2W9 335 aaKnown RBP20.85■□□□□ 0.93
PTCH1-210ENST00000468211 RHCGQ9UBD6 479 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 GPR160Q9UJ42 338 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 METRNQ9UJH8 293 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 TANC2Q9HCD6 1990 aa20.85■□□□□ 0.93
PTCH1-210ENST00000468211 PCMT1P22061 227 aa20.84■□□□□ 0.93
PTCH1-210ENST00000468211 SELENOWP63302 87 aa20.84■□□□□ 0.93
PTCH1-210ENST00000468211 PCGF3Q3KNV8 242 aa20.84■□□□□ 0.93
PTCH1-210ENST00000468211 FAM27BQ5VT28 67 aa20.84■□□□□ 0.93
PTCH1-210ENST00000468211 USP51Q70EK9 711 aa20.84■□□□□ 0.93
PTCH1-210ENST00000468211 VTCN1Q7Z7D3 282 aa20.84■□□□□ 0.93
PTCH1-210ENST00000468211 MICU2Q8IYU8 434 aa20.84■□□□□ 0.93
PTCH1-210ENST00000468211 MARS2Q96GW9 593 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms