RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 CALCRP30988 508 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 SLC6A6P31641 620 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 TTKP33981 857 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 IDH3GP51553 393 aaPredicted RBP8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 RPS6KA3P51812 740 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 ART1P52961 327 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 RAB1AP62820 205 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 HGFACQ04756 655 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 CD47Q08722 323 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 COX10Q12887 443 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 FAM27BQ5VT28 67 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 C11orf71Q6IPW1 123 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 SLC22A25Q6T423 547 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 PTCHD4Q6ZW05 846 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 KRTAP1-3Q8IUG1 177 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 ZNF584Q8IVC4 421 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 DEPDC4Q8N2C3 294 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 NUP37Q8NFH4 326 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 OR4F15Q8NGB8 312 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 UTP4Q969X6 686 aaKnown RBP8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 RASD2Q96D21 266 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 SAMD8Q96LT4 415 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 DDOQ99489 341 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 CCL19Q99731 98 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 WACQ9BTA9 647 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 TRAF4Q9BUZ4 470 aaPredicted RBP8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 GSX2Q9BZM3 304 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 YY1AP1Q9H869 796 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 ARMC1Q9NVT9 282 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 DNAJB9Q9UBS3 223 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 IER3IP1Q9Y5U9 82 aa8.22□□□□□ -1.09
SDCCAG3-208ENST00000466579 BHLHE40O14503 412 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 XKRYO14609 159 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 PPP1R3DO95685 299 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 CRYAAP02489 173 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 SERPINA5P05154 406 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 CST2P09228 141 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 CD79AP11912 226 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 CTLA4P16410 223 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 APOBEC3AP31941 199 aaPredicted RBP8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 CDKN2AP42771 156 aaKnown RBP8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 GIPRP48546 466 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 PTDSS1P48651 473 aaKnown RBP8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 NKX6-1P78426 367 aaPredicted RBP8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 CBX1P83916 185 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 PPP1R8Q12972 351 aaKnown RBP8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 CCNIQ14094 377 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 KCNMB1Q16558 191 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 SLC36A2Q495M3 483 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 ZNF362Q5T0B9 420 aaPredicted RBP8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 PRSS57Q6UWY2 283 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 SLC16A14Q7RTX9 510 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 TMEM179BQ7Z7N9 219 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 SYT9Q86SS6 491 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 AQP11Q8NBQ7 271 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 OR10G2Q8NGC3 310 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 OR8D4Q8NGM9 314 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 GIPC3Q8TF64 312 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 TMEM171Q8WVE6 324 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 NRBF2Q96F24 287 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 SH3GL3Q99963 347 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 ZNF442Q9H7R0 627 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 NTN4Q9HB63 628 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 POLE4Q9NR33 117 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 FAIMQ9NVQ4 179 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 IL20RAQ9UHF4 553 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 MOKQ9UQ07 419 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 U3KQV3 271 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 ARFGEF3Q5TH69 2177 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 USF3Q68DE3 2245 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 RTTNQ86VV8 2226 aa8.21□□□□□ -1.1
SDCCAG3-208ENST00000466579 ITPR3Q14573 2671 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 HIVEP1P15822 2718 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 IGLV1-36A0A0B4J1U3 117 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 H7C1C5 153 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 EBAG9O00559 213 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 SMPD2O60906 423 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 KHDRBS3O75525 346 aaKnown RBP8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 SNAP29O95721 258 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 RAB36O95755 333 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 SCG5P05408 212 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 PATE4P0C8F1 98 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 HIST1H1CP16403 213 aaKnown RBP8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 MSR1P21757 451 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 NR4A1P22736 598 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 CDAP32320 146 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 CAPZA2P47755 286 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 PTH2RP49190 550 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 LCN6P62502 163 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 PIGFQ07326 219 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 ENDOGQ14249 297 aaKnown RBP8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 RAB39AQ14964 217 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 EFNB3Q15768 340 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 ATP6AP1Q15904 470 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 ETFDHQ16134 617 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 SWI5Q1ZZU3 235 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 MST1LQ2TV78 715 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 AGAP6Q5VW22 663 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 TMEM53Q6P2H8 277 aa8.2□□□□□ -1.1
SDCCAG3-208ENST00000466579 SHQ1Q6PI26 577 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms