RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 ERICH5Q6P6B1 374 aa16.36■□□□□ 0.21
COL9A3-206ENST00000466532 OR1J1Q8NGS3 322 aa16.36■□□□□ 0.21
COL9A3-206ENST00000466532 LIPHQ8WWY8 451 aa16.36■□□□□ 0.21
COL9A3-206ENST00000466532 METTL17Q9H7H0 456 aaPredicted RBP16.36■□□□□ 0.21
COL9A3-206ENST00000466532 SIAEQ9HAT2 523 aa16.36■□□□□ 0.21
COL9A3-206ENST00000466532 CCNB1IP1Q9NPC3 277 aa16.36■□□□□ 0.21
COL9A3-206ENST00000466532 MED31Q9Y3C7 131 aa16.36■□□□□ 0.21
COL9A3-206ENST00000466532 GRIP1Q9Y3R0 1128 aa16.36■□□□□ 0.21
COL9A3-206ENST00000466532 MRASO14807 208 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 IFNA14P01570 189 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 TSPAN19P0C672 248 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 THRBP10828 461 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 DRD4P21917 467 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 CCNOP22674 350 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 LMO4P61968 165 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 MRPS34P82930 218 aaKnown RBP16.35■□□□□ 0.21
COL9A3-206ENST00000466532 GLO1Q04760 184 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 FMODQ06828 376 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 CD47Q08722 323 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 LAPTM4AQ15012 233 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 LRRC23Q53EV4 343 aaPredicted RBP16.35■□□□□ 0.21
COL9A3-206ENST00000466532 COQ5Q5HYK3 327 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 CPEB3Q8NE35 698 aaKnown RBP16.35■□□□□ 0.21
COL9A3-206ENST00000466532 OR51F2Q8NH61 342 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 HDAC2Q92769 488 aaKnown RBP16.35■□□□□ 0.21
COL9A3-206ENST00000466532 ZNF583Q96ND8 569 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 LRRC37BQ96QE4 947 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 OCEL1Q9H607 264 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 SMURF2Q9HAU4 748 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 MRGBPQ9NV56 204 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 NKIRAS2Q9NYR9 191 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 UGT2A1Q9Y4X1 527 aa16.35■□□□□ 0.21
COL9A3-206ENST00000466532 IGKV1D-43A0A0B4J1Z2 117 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 NPIPB13A6NJU9 1138 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 BBIP1A8MTZ0 92 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 NPIPB4C9JG80 1138 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 TPD52L2O43399 206 aaKnown RBP16.34■□□□□ 0.21
COL9A3-206ENST00000466532 PIP5K1CO60331 668 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 NPPAP01160 153 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 MT-ND5P03915 603 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 ZNF32P17041 273 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 STOMP27105 288 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 TEKQ02763 1124 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 MVKQ03426 396 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 KLF10Q13118 480 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 TOP3AQ13472 1001 aaPredicted RBP16.34■□□□□ 0.21
COL9A3-206ENST00000466532 SGCAQ16586 387 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 MOGQ16653 247 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 CYBRD1Q53TN4 286 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 AVPI1Q5T686 147 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 C10orf82Q8WW14 230 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 NSMAFQ92636 917 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 NABP1Q96AH0 204 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 NMD3Q96D46 503 aaKnown RBP16.34■□□□□ 0.21
COL9A3-206ENST00000466532 TXNIPQ9H3M7 391 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 WNK2Q9Y3S1 2297 aa16.34■□□□□ 0.21
COL9A3-206ENST00000466532 IGHV1-69-2A0A0G2JMI3 117 aa16.33■□□□□ 0.2
COL9A3-206ENST00000466532 IGHV3-13P01766 116 aa16.33■□□□□ 0.2
COL9A3-206ENST00000466532 TROVE2P10155 538 aaKnown RBP eCLIP16.33■□□□□ 0.2
COL9A3-206ENST00000466532 NR2C1P13056 603 aa16.33■□□□□ 0.2
COL9A3-206ENST00000466532 CRYBB2P43320 205 aa16.33■□□□□ 0.2
COL9A3-206ENST00000466532 MAPRE2Q15555 327 aa16.33■□□□□ 0.2
COL9A3-206ENST00000466532 TSTQ16762 297 aaKnown RBP16.33■□□□□ 0.2
COL9A3-206ENST00000466532 ALG10Q5BKT4 473 aa16.33■□□□□ 0.2
COL9A3-206ENST00000466532 SHQ1Q6PI26 577 aaKnown RBP16.33■□□□□ 0.2
COL9A3-206ENST00000466532 GTF3AQ92664 365 aaKnown RBP16.33■□□□□ 0.2
COL9A3-206ENST00000466532 TPD52L3Q96J77 140 aa16.33■□□□□ 0.2
COL9A3-206ENST00000466532 POM121L2Q96KW2 1035 aa16.33■□□□□ 0.2
COL9A3-206ENST00000466532 DECR2Q9NUI1 292 aa16.33■□□□□ 0.2
COL9A3-206ENST00000466532 ARGLU1Q9NWB6 273 aaPredicted RBP16.33■□□□□ 0.2
COL9A3-206ENST00000466532 HIF3AQ9Y2N7 669 aa16.33■□□□□ 0.2
COL9A3-206ENST00000466532 TRAV20A0A0B4J274 112 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 C5orf49A4QMS7 147 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 GMNCA6NCL1 334 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 ARHGAP32A7KAX9 2087 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 FAM220BPB1ANY3 271 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 DYSFO75923 2080 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 IFI30P13284 250 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 KDELR2P33947 212 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 ARFIP2P53365 341 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 ERVK-25P63136 954 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 ST3GAL3Q11203 375 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 SF3A3Q12874 501 aaKnown RBP eCLIP16.32■□□□□ 0.23e-6■■■□□ 18.4
COL9A3-206ENST00000466532 SPATA46Q5T0L3 261 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 SLC25A47Q6Q0C1 308 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 USP51Q70EK9 711 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 ZNF101Q8IZC7 436 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 PCYOX1LQ8NBM8 494 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 AKR7LQ8NHP1 331 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 PRRC1Q96M27 445 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 ZNF665Q9H7R5 613 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 SAR1AQ9NR31 198 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 GID8Q9NWU2 228 aa16.32■□□□□ 0.2
COL9A3-206ENST00000466532 EIF3KQ9UBQ5 218 aaKnown RBP16.32■□□□□ 0.2
COL9A3-206ENST00000466532 LOC100653049A0A140TA62 436 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 KRT34O76011 436 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 ANPEPP15144 967 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 GCH1P30793 250 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 IFNA8P32881 189 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 WNT5AP41221 380 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms