RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 RHEBL1Q8TAI7 183 aa1.13□□□□□ -2.23
NUCKS1-202ENST00000464938 STARD8Q92502 1023 aa1.13□□□□□ -2.23
NUCKS1-202ENST00000464938 CCDC77Q9BR77 488 aa1.13□□□□□ -2.23
NUCKS1-202ENST00000464938 NUP58Q9BVL2 599 aa1.13□□□□□ -2.23
NUCKS1-202ENST00000464938 RPF2Q9H7B2 306 aaKnown RBP1.13□□□□□ -2.23
NUCKS1-202ENST00000464938 NOX3Q9HBY0 568 aa1.13□□□□□ -2.23
NUCKS1-202ENST00000464938 GPATCH2LQ9NWQ4 482 aa1.13□□□□□ -2.23
NUCKS1-202ENST00000464938 PSMC3IPQ9P2W1 217 aaPredicted RBP1.13□□□□□ -2.23
NUCKS1-202ENST00000464938 LRP4O75096 1905 aa1.13□□□□□ -2.23
NUCKS1-202ENST00000464938 TRIOBPQ9H2D6 2365 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 GPATCH8Q9UKJ3 1502 aaKnown RBP1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 IGKV6D-21A0A0A0MT36 114 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 LRCOL1A6NCL2 159 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 FAM47DPA6NHR8 397 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 HIDE1A8MVS5 230 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 DYNC1I1O14576 645 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 RAB29O14966 203 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 CLOCKO15516 846 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 EEDO75530 441 aaKnown RBP1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 RP2O75695 350 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 OR2F2O95006 317 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 RAB3DO95716 219 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 AIFM1O95831 613 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 PABPC4LP0CB38 370 aaKnown RBP1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 ZNF250P15622 560 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 CHMLP26374 656 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 GDI1P31150 447 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 ZNF138P52744 262 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 ACLYP53396 1101 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 LINC00315P59091 139 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 PFN3P60673 137 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 NUTF2P61970 127 aaKnown RBP1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 ADARB1P78563 741 aaKnown RBP1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 SLC25A11Q02978 314 aaKnown RBP1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 MXD1Q05195 221 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 LRRC63Q05C16 580 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 SMARCB1Q12824 385 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 SRSF5Q13243 272 aaKnown RBP1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 EIF4EBP1Q13541 118 aaPredicted RBP1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 GGTLC2Q14390 218 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 CLINT1Q14677 625 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 PON2Q15165 354 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 UBE2SQ16763 222 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 RAET1LQ5VY80 246 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 SLC8B1Q6J4K2 584 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 C19orf35Q6ZS72 473 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 NTM-AS1Q6ZSK4 140 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 FAM92BQ6ZTR7 304 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 LIX1Q8N485 282 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 CCDC54Q8NEL0 328 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 UBALD1Q8TB05 177 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 CREB3L1Q96BA8 519 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 PKNOX2Q96KN3 472 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 ZNF681Q96N22 645 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 ZNF578Q96N58 590 aaPredicted RBP1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 TSNARE1Q96NA8 513 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 OR2A5Q96R48 311 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 MYCBPQ99417 103 aaPredicted RBP1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 LZTS2Q9BRK4 669 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 UBE2ZQ9H832 354 aaPredicted RBP1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 ANKRA2Q9H9E1 313 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 TMEM165Q9HC07 324 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 ISYNA1Q9NPH2 558 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 NMRK1Q9NWW6 199 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 OPN4Q9UHM6 478 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 LSM7Q9UK45 103 aaKnown RBP1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 KIAA1257Q9ULG3 409 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 ING4Q9UNL4 249 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 RABL2BQ9UNT1 228 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 PSG11Q9UQ72 335 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 MRPS18BQ9Y676 258 aaKnown RBP1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 ADAMTS13Q76LX8 1427 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 IGSF9BQ9UPX0 1349 aa1.12□□□□□ -2.23
NUCKS1-202ENST00000464938 SLIT3O75094 1523 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 COL4A4P53420 1690 aaPredicted RBP1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 CAMTA1Q9Y6Y1 1673 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 IGLV1-50A0A075B6I6 118 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 IGKV2D-24A0A075B6R9 120 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 IGLV1-36A0A0B4J1U3 117 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 TRBV9A0A0B4J1U6 114 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 IGHV3-74A0A0B4J1X5 117 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 ZNF816-ZNF321PA0A0X1KG74 233 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 OR2AG2A6NM03 316 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 CDC7O00311 574 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 NDUFAB1O14561 156 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 DNALI1O14645 258 aaPredicted RBP1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 KMOO15229 486 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 ZNF207O43670 478 aaKnown RBP1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 KLHL41O60662 606 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 DPM1O60762 260 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 AQP8O94778 261 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 CLIC3O95833 236 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 IGKV3-11P04433 115 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 SERPINA5P05154 406 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 PLEKP08567 350 aaPredicted RBP1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 TROVE2P10155 538 aaKnown RBP eCLIP1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 CCNB1P14635 433 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 ATF6P18850 670 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 TNNI1P19237 187 aa1.11□□□□□ -2.23
NUCKS1-202ENST00000464938 CDKN2BP42772 138 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms