RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 POLE3Q9NRF9 147 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 MRPS18AQ9NVS2 196 aaKnown RBP13.99□□□□□ -0.17
LMNB1-203ENST00000460265 FLVCR2Q9UPI3 526 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 ALPK3Q96L96 1907 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 AHSA1O95433 338 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 CD14P08571 375 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 PNMTP11086 282 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 IL9P15248 144 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 BTCP35070 178 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 MTNR1BP49286 362 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 RPL18Q07020 188 aaKnown RBP13.98□□□□□ -0.17
LMNB1-203ENST00000460265 HLXQ14774 488 aaPredicted RBP13.98□□□□□ -0.17
LMNB1-203ENST00000460265 PYHIN1Q6K0P9 492 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 LRRC28Q86X40 367 aaPredicted RBP13.98□□□□□ -0.17
LMNB1-203ENST00000460265 ARL5BQ96KC2 179 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 JSRP1Q96MG2 331 aaPredicted RBP13.98□□□□□ -0.17
LMNB1-203ENST00000460265 ABHD1Q96SE0 405 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 COMMD4Q9H0A8 199 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 OR10A4Q9H209 315 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 PRDM9Q9NQV7 894 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 COL4A3Q01955 1670 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 ZP1P60852 638 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 GK2Q14410 553 aaPredicted RBP13.98□□□□□ -0.17
LMNB1-203ENST00000460265 LIPNQ5VXI9 398 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 SLC25A25Q6KCM7 469 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 LRRC69Q6ZNQ3 347 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 KRT77Q7Z794 578 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.98□□□□□ -0.17
LMNB1-203ENST00000460265 OR56B4Q8NH76 319 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 ACOT12Q8WYK0 555 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 HSD17B8Q92506 261 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 C8orf44Q96CB5 159 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 ISYNA1Q9NPH2 558 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 ZNF69Q9UC07 566 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 EPHA6Q9UF33 1036 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 PQLC2LA1A4F0 135 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 ZNF593O00488 134 aaPredicted RBP13.98□□□□□ -0.17
LMNB1-203ENST00000460265 FASLGP48023 281 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 SLC35F3Q8IY50 421 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 LGALS14Q8TCE9 139 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 GPR119Q8TDV5 335 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 ZNRF4Q8WWF5 429 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 SHDQ96IW2 340 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 SLC46A1Q96NT5 459 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 SEC61A2Q9H9S3 476 aa13.98□□□□□ -0.17
LMNB1-203ENST00000460265 KIF26BQ2KJY2 2108 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 MEIS3P1A6NDR6 274 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 ITGA10O75578 1167 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 EIF3GO75821 320 aaKnown RBP eCLIP13.97□□□□□ -0.17
LMNB1-203ENST00000460265 PGCP20142 388 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 CCKBRP32239 447 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 GFOD2Q3B7J2 385 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 SLC6A19Q695T7 634 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 C5orf46Q6UWT4 87 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 ZNF440Q8IYI8 595 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 POMGNT2Q8NAT1 580 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 OR6S1Q8NH40 331 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 OR5AK2Q8NH90 309 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 ADAMTS18Q8TE60 1221 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 ACTR6Q9GZN1 396 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 RLN1P04808 185 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 RBM34P42696 430 aaKnown RBP13.97□□□□□ -0.17
LMNB1-203ENST00000460265 PPICP45877 212 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 DIO1P49895 249 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 AFF3P51826 1226 aaKnown RBP13.97□□□□□ -0.17
LMNB1-203ENST00000460265 PTPMT1Q8WUK0 201 aaPredicted RBP13.97□□□□□ -0.17
LMNB1-203ENST00000460265 OR6C1Q96RD1 312 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 LPAR4Q99677 370 aa13.97□□□□□ -0.17
LMNB1-203ENST00000460265 LMF2Q9BU23 707 aaKnown RBP13.97□□□□□ -0.17
LMNB1-203ENST00000460265 TRABD2BA6NFA1 517 aa13.96□□□□□ -0.17
LMNB1-203ENST00000460265 MPTX1A8MV57 137 aa13.96□□□□□ -0.17
LMNB1-203ENST00000460265 MCRIP1C9JLW8 97 aa13.96□□□□□ -0.17
LMNB1-203ENST00000460265 PIAS2O75928 621 aa13.96□□□□□ -0.17
LMNB1-203ENST00000460265 STARP49675 285 aa13.96□□□□□ -0.17
LMNB1-203ENST00000460265 HFEQ30201 348 aa13.96□□□□□ -0.17
LMNB1-203ENST00000460265 RNLSQ5VYX0 342 aa13.96□□□□□ -0.17
LMNB1-203ENST00000460265 OR7E24Q6IFN5 339 aa13.96□□□□□ -0.17
LMNB1-203ENST00000460265 MESP1Q9BRJ9 268 aa13.96□□□□□ -0.17
LMNB1-203ENST00000460265 INPP5EQ9NRR6 644 aa13.96□□□□□ -0.17
LMNB1-203ENST00000460265 CYSLTR2Q9NS75 346 aa13.96□□□□□ -0.17
LMNB1-203ENST00000460265 ZNF823P16415 610 aa13.96□□□□□ -0.17
LMNB1-203ENST00000460265 OC90Q02509 493 aaPredicted RBP13.96□□□□□ -0.17
LMNB1-203ENST00000460265 BTN2A1Q7KYR7 527 aa13.96□□□□□ -0.17
LMNB1-203ENST00000460265 MRGPREQ86SM8 312 aa13.96□□□□□ -0.17
LMNB1-203ENST00000460265 KLHDC3Q9BQ90 382 aa13.96□□□□□ -0.17
LMNB1-203ENST00000460265 SHISA8B8ZZ34 492 aa13.96□□□□□ -0.18
LMNB1-203ENST00000460265 PEX14O75381 377 aa13.96□□□□□ -0.18
LMNB1-203ENST00000460265 FREM3P0C091 2139 aa13.96□□□□□ -0.18
LMNB1-203ENST00000460265 ATF1P18846 271 aa13.96□□□□□ -0.18
LMNB1-203ENST00000460265 DGCR2P98153 550 aa13.96□□□□□ -0.18
LMNB1-203ENST00000460265 GSG1LQ6UXU4 331 aa13.96□□□□□ -0.18
LMNB1-203ENST00000460265 Q6ZTK2 550 aa13.96□□□□□ -0.18
LMNB1-203ENST00000460265 TMUB2Q71RG4 321 aa13.96□□□□□ -0.18
LMNB1-203ENST00000460265 TMEM17Q86X19 198 aa13.96□□□□□ -0.18
LMNB1-203ENST00000460265 OR2I1PQ8NGU4 316 aa13.96□□□□□ -0.18
LMNB1-203ENST00000460265 OR10K1Q8NGX5 313 aa13.96□□□□□ -0.18
LMNB1-203ENST00000460265 OR1S1Q8NH92 325 aa13.96□□□□□ -0.18
LMNB1-203ENST00000460265 FAM131CQ96AQ9 280 aa13.96□□□□□ -0.18
LMNB1-203ENST00000460265 SEMA4CQ9C0C4 833 aa13.96□□□□□ -0.18
LMNB1-203ENST00000460265 WDR76Q9H967 626 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms