RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 MYPOPQ86VE0 399 aaPredicted RBP12.48□□□□□ -0.41
COL3A1-203ENST00000450867 LNX2Q8N448 690 aa12.48□□□□□ -0.41
COL3A1-203ENST00000450867 IL17RDQ8NFM7 739 aa12.48□□□□□ -0.41
COL3A1-203ENST00000450867 OR52L1Q8NGH7 329 aa12.48□□□□□ -0.41
COL3A1-203ENST00000450867 FGFBP3Q8TAT2 258 aa12.48□□□□□ -0.41
COL3A1-203ENST00000450867 FBXW5Q969U6 566 aa12.48□□□□□ -0.41
COL3A1-203ENST00000450867 ERMAPQ96PL5 475 aaPredicted RBP12.48□□□□□ -0.41
COL3A1-203ENST00000450867 NIPSNAP1Q9BPW8 284 aa12.48□□□□□ -0.41
COL3A1-203ENST00000450867 WACQ9BTA9 647 aa12.48□□□□□ -0.41
COL3A1-203ENST00000450867 IFT27Q9BW83 186 aa12.48□□□□□ -0.41
COL3A1-203ENST00000450867 GRIP2Q9C0E4 1043 aa12.48□□□□□ -0.41
COL3A1-203ENST00000450867 EGLN3Q9H6Z9 239 aa12.48□□□□□ -0.41
COL3A1-203ENST00000450867 UBTD1Q9HAC8 227 aa12.48□□□□□ -0.41
COL3A1-203ENST00000450867 REV1Q9UBZ9 1251 aa12.48□□□□□ -0.41
COL3A1-203ENST00000450867 PLEKHA6Q9Y2H5 1048 aa12.48□□□□□ -0.41
COL3A1-203ENST00000450867 AP4S1Q9Y587 144 aa12.48□□□□□ -0.41
COL3A1-203ENST00000450867 H7C1C5 153 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 SOCS2O14508 198 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 E2F6O75461 281 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 CST2P09228 141 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 FCGR1AP12314 374 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 ANXA8P13928 327 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 CTLA4P16410 223 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 CDH11P55287 796 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 LCN6P62502 163 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 RAB1AP62820 205 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 TESK1Q15569 626 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 SLC36A2Q495M3 483 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 FAHD1Q6P587 224 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 SLC22A25Q6T423 547 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 SLC16A14Q7RTX9 510 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 DTX2Q86UW9 622 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 DNAJC9Q8WXX5 260 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 NEUROG1Q92886 237 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 PIGTQ969N2 578 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 GTPBP3Q969Y2 492 aaKnown RBP12.47□□□□□ -0.41
COL3A1-203ENST00000450867 DDOQ99489 341 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 FOXC2Q99958 501 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 SH3GL3Q99963 347 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 SYT4Q9H2B2 425 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 CXXC4Q9H2H0 198 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 SEC61A2Q9H9S3 476 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 BEX4Q9NWD9 120 aaPredicted RBP12.47□□□□□ -0.41
COL3A1-203ENST00000450867 PDP1Q9P0J1 537 aaPredicted RBP12.47□□□□□ -0.41
COL3A1-203ENST00000450867 BAIAP2Q9UQB8 552 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 VPS13CQ709C8 3753 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 HIVEP1P15822 2718 aa12.47□□□□□ -0.41
COL3A1-203ENST00000450867 FLNAP21333 2647 aaKnown RBP12.46□□□□□ -0.41
COL3A1-203ENST00000450867 IGLV1-36A0A0B4J1U3 117 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 IGHV2OR16-5A0A0B4J2B6 119 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 E7EQL1 145 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 ATP6V1G2-DDX39BF2Z307 99 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 RAB36O95755 333 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 CRYAAP02489 173 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 SERPINA5P05154 406 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 CELA3BP08861 270 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 CD79AP11912 226 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 PAX1P15863 534 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 HIST1H1CP16403 213 aaKnown RBP12.46□□□□□ -0.41
COL3A1-203ENST00000450867 MSR1P21757 451 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 FASP25445 335 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 CRABP1P29762 137 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 CDAP32320 146 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 CAPZA2P47755 286 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 GIPRP48546 466 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 PTDSS1P48651 473 aaKnown RBP12.46□□□□□ -0.41
COL3A1-203ENST00000450867 IDH3GP51553 393 aaPredicted RBP12.46□□□□□ -0.41
COL3A1-203ENST00000450867 KEAP1Q14145 624 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 KCNMB1Q16558 191 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 PGGHGQ32M88 737 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 ZNF362Q5T0B9 420 aaPredicted RBP12.46□□□□□ -0.41
COL3A1-203ENST00000450867 ZNF544Q6NX49 715 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 B3GLCTQ6Y288 498 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 SYT9Q86SS6 491 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 ZBTB46Q86UZ6 589 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 ZNF584Q8IVC4 421 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 DEPDC4Q8N2C3 294 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 PIAS4Q8N2W9 510 aaPredicted RBP12.46□□□□□ -0.41
COL3A1-203ENST00000450867 NPEPL1Q8NDH3 523 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 NSMAFQ92636 917 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 HTRA1Q92743 480 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 NUAK2Q9H093 628 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 RACGAP1Q9H0H5 632 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 C1orf198Q9H425 327 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 POLE4Q9NR33 117 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 TBC1D23Q9NUY8 699 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 CISD1Q9NZ45 108 aaKnown RBP12.46□□□□□ -0.41
COL3A1-203ENST00000450867 MOKQ9UQ07 419 aa12.46□□□□□ -0.41
COL3A1-203ENST00000450867 CHD3Q12873 2000 aaKnown RBP12.45□□□□□ -0.42
COL3A1-203ENST00000450867 OVOL3O00110 214 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 DCTN6O00399 190 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 KHDRBS3O75525 346 aaKnown RBP12.45□□□□□ -0.42
COL3A1-203ENST00000450867 ZNF35P13682 527 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 LAP3P28838 519 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 CALCRP30988 508 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 ARHGDIAP52565 204 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 NKX6-1P78426 367 aaPredicted RBP12.45□□□□□ -0.42
COL3A1-203ENST00000450867 ENDOGQ14249 297 aaKnown RBP12.45□□□□□ -0.42
COL3A1-203ENST00000450867 ETFDHQ16134 617 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 DEFB113Q30KQ7 82 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms