RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 SNAP29O95721 258 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 MMP7P09237 267 aaPredicted RBP11.73□□□□□ -0.53
TOM1-211ENST00000449508 IFI30P13284 250 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 ZNF250P15622 560 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 CCNOP22674 350 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 MAGEB1P43366 347 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 ZNF133P52736 654 aaPredicted RBP11.73□□□□□ -0.53
TOM1-211ENST00000449508 MRPS34P82930 218 aaKnown RBP11.73□□□□□ -0.53
TOM1-211ENST00000449508 FMODQ06828 376 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 CD47Q08722 323 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 ALG10Q5BKT4 473 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 PABPC1L2AQ5JQF8 200 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 MICU2Q8IYU8 434 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 CPEB3Q8NE35 698 aaKnown RBP11.73□□□□□ -0.53
TOM1-211ENST00000449508 CLDND2Q8NHS1 167 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 SNX33Q8WV41 574 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 LZICQ8WZA0 190 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 NSMAFQ92636 917 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 HDAC2Q92769 488 aaKnown RBP11.73□□□□□ -0.53
TOM1-211ENST00000449508 BPIFA2Q96DR5 249 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 C1orf159Q96HA4 380 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 TSPAN32Q96QS1 320 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 RBP7Q96R05 134 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 HINT3Q9NQE9 182 aaKnown RBP11.73□□□□□ -0.53
TOM1-211ENST00000449508 ZNF275Q9NSD4 429 aaPredicted RBP11.73□□□□□ -0.53
TOM1-211ENST00000449508 SLCO1C1Q9NYB5 712 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 A4GNTQ9UNA3 340 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 CAPN7Q9Y6W3 813 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 IGLV3-9A0A075B6K5 115 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 IGKV1D-43A0A0B4J1Z2 117 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 HTR3EA5X5Y0 456 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 NPIPB13A6NJU9 1138 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 C17orf100A8MU93 164 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 NPIPB4C9JG80 1138 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 CDC14BO60729 498 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 SAGP10523 405 aaPredicted RBP11.72□□□□□ -0.53
TOM1-211ENST00000449508 NR2C1P13056 603 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 ZNF32P17041 273 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 DRD4P21917 467 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 STOMP27105 288 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 YAP1P46937 504 aaKnown RBP11.72□□□□□ -0.53
TOM1-211ENST00000449508 DVL1P1P54792 670 aaPredicted RBP11.72□□□□□ -0.53
TOM1-211ENST00000449508 CCL8P80075 99 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 MRPS11P82912 194 aaKnown RBP11.72□□□□□ -0.53
TOM1-211ENST00000449508 TOP3AQ13472 1001 aaPredicted RBP11.72□□□□□ -0.53
TOM1-211ENST00000449508 TAF11Q15544 211 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 MOGQ16653 247 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 LIPNQ5VXI9 398 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 SLC25A47Q6Q0C1 308 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 POU5F2Q8N7G0 328 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 OR1J1Q8NGS3 322 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 RCN3Q96D15 328 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 PRRC1Q96M27 445 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 C19orf24Q9BVV8 132 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 ZNF416Q9BWM5 594 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 SMURF2Q9HAU4 748 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 TREM2Q9NZC2 230 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 RHCGQ9UBD6 479 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 HIF3AQ9Y2N7 669 aa11.72□□□□□ -0.53
TOM1-211ENST00000449508 WNT9BO14905 357 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 PCMT1P22061 227 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 GUCA1AP43080 201 aaPredicted RBP11.71□□□□□ -0.53
TOM1-211ENST00000449508 CTXN1P60606 82 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 RPL27P61353 136 aaKnown RBP11.71□□□□□ -0.53
TOM1-211ENST00000449508 ERVK-25P63136 954 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 GUCY1A3Q02108 690 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 PCGF3Q3KNV8 242 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 THEM4Q5T1C6 240 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 FAM27BQ5VT28 67 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 RINLQ6ZS11 566 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 IGFN1Q86VF2 1251 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 GLCCI1Q86VQ1 547 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 OR51A7Q8NH64 312 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 RP9Q8TA86 221 aaKnown RBP11.71□□□□□ -0.53
TOM1-211ENST00000449508 NABP1Q96AH0 204 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 NMD3Q96D46 503 aaKnown RBP11.71□□□□□ -0.53
TOM1-211ENST00000449508 FNDC11Q9BVV2 318 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 RACGAP1Q9H0H5 632 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 LPAR2Q9HBW0 351 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 DECR2Q9NUI1 292 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 CMTM6Q9NX76 183 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 ARMCX1Q9P291 453 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 EIF3KQ9UBQ5 218 aaKnown RBP11.71□□□□□ -0.53
TOM1-211ENST00000449508 AP3M1Q9Y2T2 418 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 UGT2A1Q9Y4X1 527 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 SNX13Q9Y5W8 968 aa11.71□□□□□ -0.53
TOM1-211ENST00000449508 C5orf49A4QMS7 147 aa11.7□□□□□ -0.54
TOM1-211ENST00000449508 GMNCA6NCL1 334 aa11.7□□□□□ -0.54
TOM1-211ENST00000449508 FAM157AC9JC47 383 aa11.7□□□□□ -0.54
TOM1-211ENST00000449508 J3KTA2 159 aa11.7□□□□□ -0.54
TOM1-211ENST00000449508 GSTA4O15217 222 aa11.7□□□□□ -0.54
TOM1-211ENST00000449508 SLC22A2O15244 555 aa11.7□□□□□ -0.54
TOM1-211ENST00000449508 TPD52L2O43399 206 aaKnown RBP11.7□□□□□ -0.54
TOM1-211ENST00000449508 RP2O75695 350 aa11.7□□□□□ -0.54
TOM1-211ENST00000449508 ZNF682O95780 498 aa11.7□□□□□ -0.54
TOM1-211ENST00000449508 IGHV3-13P01766 116 aa11.7□□□□□ -0.54
TOM1-211ENST00000449508 TFP02787 698 aa11.7□□□□□ -0.54
TOM1-211ENST00000449508 MT-ND5P03915 603 aa11.7□□□□□ -0.54
TOM1-211ENST00000449508 IFNW1P05000 195 aa11.7□□□□□ -0.54
TOM1-211ENST00000449508 MAKP20794 623 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms