RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 C8orf59Q8N0T1 100 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 FAM26EQ8N5C1 309 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 RHOXF1Q8NHV9 184 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 ZNF582Q96NG8 517 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 FOXB1Q99853 325 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 RACGAP1Q9H0H5 632 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 SEC61A2Q9H9S3 476 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 KCNJ16Q9NPI9 418 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 TAS2R16Q9NYV7 291 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 A0A096LPE4 126 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 A0A1W2PPZ6 126 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 CIB4A0PJX0 185 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 CCDC182A6NF36 153 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 TVP23AA6NH52 213 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 ZNF99A8MXY4 864 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 ENTPD6O75354 484 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 RAD51DO75771 328 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 CLDN14O95500 239 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 AGAP20933 346 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 GRNP28799 593 aaKnown RBP15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 RPS7P62081 194 aaKnown RBP15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 SGCAQ16586 387 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 SFRP5Q5T4F7 317 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 KLHL24Q6TFL4 600 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 ZNF813Q6ZN06 617 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 BHLHA15Q7RTS1 189 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 ZNF511Q8NB15 262 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 SETD9Q8NE22 299 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 OR1K1Q8NGR3 316 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 OR6K6Q8NGW6 343 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 CNIH3Q8TBE1 160 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 APH1BQ8WW43 257 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 TRUB1Q8WWH5 349 aaKnown RBP15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 ZMYND19Q96E35 227 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 TMEM38BQ9NVV0 291 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 H2AFY2Q9P0M6 372 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 RAB26Q9ULW5 256 aa15.79■□□□□ 0.12
TRAPPC4-203ENST00000447216 RTTNQ86VV8 2226 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 SH3D21A4FU49 640 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 GAAP10253 952 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 LAP3P28838 519 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 CCKARP32238 428 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 ISL1P61371 349 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 P2RY6Q15077 328 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 MEP1BQ16820 701 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 HIKESHIQ53FT3 197 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 LINC01590Q5TEZ4 76 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 NXNL2Q5VZ03 156 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 FOXL2NBQ6ZUU3 175 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 GLB1L2Q8IW92 636 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 BCL2L2Q92843 193 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 KISS1RQ969F8 398 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 NABP1Q96AH0 204 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 NELFAQ9H3P2 528 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 EMC7Q9NPA0 242 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 CLN6Q9NWW5 311 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 ELOVL5Q9NYP7 299 aa15.78■□□□□ 0.12
TRAPPC4-203ENST00000447216 PRODHO43272 600 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 MPZL2O60487 215 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 WBP4O75554 376 aaKnown RBP15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 GLCEO94923 617 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 HLA-DQA2P01906 255 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 TFP02787 698 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 MYF6P23409 242 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 IL32P24001 234 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 GSTT1P30711 240 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 FMO3P31513 532 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 NUDT6P53370 316 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 CDH11P55287 796 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 SH3BGRP55822 239 aaPredicted RBP15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 MRPS34P82930 218 aaKnown RBP15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 TFF3Q07654 80 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 STK11Q15831 433 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 GABRA6Q16445 453 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 OCLNQ16625 522 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 SMN1Q16637 294 aaKnown RBP15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 FBXL19-AS1Q494R0 122 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 UGT2A3Q6UWM9 527 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 MEPCEQ7L2J0 689 aaKnown RBP15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 THAP5Q7Z6K1 395 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 GID4Q8IVV7 300 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 SLC22A24Q8N4F4 322 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 SLC26A10Q8NG04 563 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 C11orf40Q8WZ69 217 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 RNASE6Q93091 150 aaKnown RBP15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 CNBD2Q96M20 576 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 SH3GL3Q99963 347 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 ANKRD60Q9BZ19 345 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 POLE4Q9NR33 117 aa15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 MRPL22Q9NWU5 206 aaKnown RBP15.77■□□□□ 0.12
TRAPPC4-203ENST00000447216 HEATR1Q9H583 2144 aaKnown RBP15.77■□□□□ 0.11
TRAPPC4-203ENST00000447216 DOPEY1Q5JWR5 2465 aa15.76■□□□□ 0.11
TRAPPC4-203ENST00000447216 A0A1W2PR80 420 aa15.76■□□□□ 0.11
TRAPPC4-203ENST00000447216 PSMB1P20618 241 aaKnown RBP15.76■□□□□ 0.11
TRAPPC4-203ENST00000447216 TUBA1BP68363 451 aa15.76■□□□□ 0.11
TRAPPC4-203ENST00000447216 TUBA4AP68366 448 aa15.76■□□□□ 0.11
TRAPPC4-203ENST00000447216 TGFBR3Q03167 851 aa15.76■□□□□ 0.11
TRAPPC4-203ENST00000447216 GLO1Q04760 184 aa15.76■□□□□ 0.11
TRAPPC4-203ENST00000447216 CDK5R2Q13319 367 aa15.76■□□□□ 0.11
TRAPPC4-203ENST00000447216 SNTB1Q13884 538 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms