RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 KRT36O76013 467 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 IGHV4-39P01824 125 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 CD99P14209 185 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 APOBEC3AP31941 199 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-204ENST00000446876 GSSP48637 474 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 MRPS34P82930 218 aaKnown RBP12.84□□□□□ -0.35
HDAC4-204ENST00000446876 DBPQ10586 325 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-204ENST00000446876 FLOT2Q14254 428 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 THEM4Q5T1C6 240 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 OTPQ5XKR4 325 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 OR2T5Q6IEZ7 315 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 C1orf94Q6P1W5 598 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 PTCHD4Q6ZW05 846 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 OR2T29Q8NH02 315 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 GNPDA2Q8TDQ7 276 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 CANT1Q8WVQ1 401 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 SAMD8Q96LT4 415 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 DENND2DQ9H6A0 471 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-204ENST00000446876 CA10Q9NS85 328 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 DHRS12A0PJE2 317 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 PRSS37A4D1T9 235 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 TRIM64A6NGJ6 449 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 TRIM64BA6NI03 449 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 GSC2O15499 205 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 TMCC2O75069 709 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 CCNB2O95067 398 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 SCG5P05408 212 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 MMP7P09237 267 aaPredicted RBP12.83□□□□□ -0.36
HDAC4-204ENST00000446876 RAP2AP10114 183 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 NR2C1P13056 603 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 CCL2P13500 99 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 CTLA4P16410 223 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 SDHAP31040 664 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 THBS4P35443 961 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 IFNGR2P38484 337 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 HMGA2P52926 109 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 SNTB2Q13425 540 aaKnown RBP12.83□□□□□ -0.36
HDAC4-204ENST00000446876 ADIPOQQ15848 244 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 MST1LQ2TV78 715 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 SLC36A2Q495M3 483 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 ZNF770Q6IQ21 691 aaPredicted RBP12.83□□□□□ -0.36
HDAC4-204ENST00000446876 TMEM53Q6P2H8 277 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 DPY19L2P2Q6ZN68 376 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 ZNF620Q6ZNG0 422 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 SPATA24Q86W54 205 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 PAQR4Q8N4S7 273 aaPredicted RBP12.83□□□□□ -0.36
HDAC4-204ENST00000446876 AQP11Q8NBQ7 271 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 OR4F15Q8NGB8 312 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 ERMAPQ96PL5 475 aaPredicted RBP12.83□□□□□ -0.36
HDAC4-204ENST00000446876 CHID1Q9BWS9 393 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 SYT4Q9H2B2 425 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 RERGLQ9H628 205 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 EGLN3Q9H6Z9 239 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 REEP1Q9H902 201 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 SIAEQ9HAT2 523 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 POMPQ9Y244 141 aa12.83□□□□□ -0.36
HDAC4-204ENST00000446876 SAMHD1Q9Y3Z3 626 aaKnown RBP12.83□□□□□ -0.36
HDAC4-204ENST00000446876 FLNAP21333 2647 aaKnown RBP12.83□□□□□ -0.36
HDAC4-204ENST00000446876 ACANP16112 2415 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 AQP12BA6NM10 295 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 GPRIN2O60269 458 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 MGRN1O60291 552 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 ENTPD5O75356 428 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 GASTP01350 101 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 SERPINA5P05154 406 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 OR4A8P0C604 315 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 ZNF35P13682 527 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 ZNF32P17041 273 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 LAP3P28838 519 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 SLC6A6P31641 620 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 CDKN2AP42771 156 aaKnown RBP12.82□□□□□ -0.36
HDAC4-204ENST00000446876 TSPAN31Q12999 210 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 DAG1Q14118 895 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 MSMPQ1L6U9 139 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 RFX4Q33E94 735 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 NRN1LQ496H8 165 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 GPR139Q6DWJ6 353 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 FOXL2NBQ6ZUU3 175 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 AQP12AQ8IXF9 295 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 NUP37Q8NFH4 326 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 FNDC8Q8TC99 324 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 TRMT61AQ96FX7 289 aaKnown RBP12.82□□□□□ -0.36
HDAC4-204ENST00000446876 IFT27Q9BW83 186 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 GRIP2Q9C0E4 1043 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 EMC7Q9NPA0 242 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 DLL4Q9NR61 685 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 SLC7A8Q9UHI5 535 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 RTTNQ86VV8 2226 aa12.82□□□□□ -0.36
HDAC4-204ENST00000446876 SLC16A7O60669 478 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 TXNDC12O95881 172 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 CST1P01037 141 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 IGFBP1P08833 259 aaPredicted RBP12.81□□□□□ -0.36
HDAC4-204ENST00000446876 NPR2P20594 1047 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 NR4A1P22736 598 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 APEX1P27695 318 aaKnown RBP12.81□□□□□ -0.36
HDAC4-204ENST00000446876 SERPINF1P36955 418 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 RPS6KA3P51812 740 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 HSF2Q03933 536 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 ENDOGQ14249 297 aaKnown RBP12.81□□□□□ -0.36
HDAC4-204ENST00000446876 SWI5Q1ZZU3 235 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms