RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 NKIRAS2Q9NYR9 191 aa13.16□□□□□ -0.3
SEC13-213ENST00000445064 RIMS3Q9UJD0 308 aa13.16□□□□□ -0.3
SEC13-213ENST00000445064 CACNG2Q9Y698 323 aa13.16□□□□□ -0.3
SEC13-213ENST00000445064 IGKV1D-43A0A0B4J1Z2 117 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 TRAV20A0A0B4J274 112 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 IGHV1-69-2A0A0G2JMI3 117 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 A0A0G2JND7 137 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 PLPP2O43688 288 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 MPZL1O95297 269 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 ZNF32P17041 273 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 STOMP27105 288 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 OR1E2P47887 323 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 ZNF133P52736 654 aaPredicted RBP13.15□□□□□ -0.3
SEC13-213ENST00000445064 MRPS34P82930 218 aaKnown RBP13.15□□□□□ -0.3
SEC13-213ENST00000445064 TEKQ02763 1124 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 FMODQ06828 376 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 CYLC2Q14093 348 aaPredicted RBP13.15□□□□□ -0.3
SEC13-213ENST00000445064 MOGQ16653 247 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 THEM4Q5T1C6 240 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 C10orf128Q5T292 105 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 ARMC4Q5T2S8 1044 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 SEMA6DQ8NFY4 1073 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 TMEM239Q8WW34 195 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 NSMAFQ92636 917 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 HDAC2Q92769 488 aaKnown RBP13.15□□□□□ -0.3
SEC13-213ENST00000445064 ECSITQ9BQ95 431 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 SIAEQ9HAT2 523 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 CCNB1IP1Q9NPC3 277 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 G6PC2Q9NQR9 355 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 UGT2A1Q9Y4X1 527 aa13.15□□□□□ -0.3
SEC13-213ENST00000445064 LOC105371242A0A075B767 164 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 CENPBD1B2RD01 187 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 MGRN1O60291 552 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 EDF1O60869 148 aaKnown RBP13.14□□□□□ -0.31
SEC13-213ENST00000445064 PNPP00491 289 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 IGHV3-13P01766 116 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 VIMP08670 466 aaKnown RBP13.14□□□□□ -0.31
SEC13-213ENST00000445064 TSPAN19P0C672 248 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 CFPP27918 469 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 MPV17P39210 176 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 RBM34P42696 430 aaKnown RBP13.14□□□□□ -0.31
SEC13-213ENST00000445064 DAP3P51398 398 aaKnown RBP13.14□□□□□ -0.31
SEC13-213ENST00000445064 ZNF81P51508 661 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 MMEL1Q495T6 779 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 SPATA46Q5T0L3 261 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 CALHM3Q86XJ0 350 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 ZNF101Q8IZC7 436 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 AKR7LQ8NHP1 331 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 ZNF418Q8TF45 676 aaPredicted RBP13.14□□□□□ -0.31
SEC13-213ENST00000445064 NABP1Q96AH0 204 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 POM121L2Q96KW2 1035 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 EIF3KQ9UBQ5 218 aaKnown RBP13.14□□□□□ -0.31
SEC13-213ENST00000445064 BAG5Q9UL15 447 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 PCDHB10Q9UN67 800 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 WIPI2Q9Y4P8 454 aa13.14□□□□□ -0.31
SEC13-213ENST00000445064 LOC100509620A0A075B734 347 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 C5orf49A4QMS7 147 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 SPRY3O43610 288 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 DEAF1O75398 565 aaPredicted RBP13.13□□□□□ -0.31
SEC13-213ENST00000445064 OR5F1O95221 314 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 MT-ND5P03915 603 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 MAKP20794 623 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 GCH1P30793 250 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 WNT5AP41221 380 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 ERVK-25P63136 954 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 PSG4Q00888 419 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 CD47Q08722 323 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 HFEQ30201 348 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 ZNF718Q3SXZ3 478 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 TMEM255AQ5JRV8 349 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 METTL21CQ5VZV1 264 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 SLC25A47Q6Q0C1 308 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 HDDC2Q7Z4H3 204 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 ZFAND2BQ8WV99 257 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 LIPHQ8WWY8 451 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 CCL17Q92583 94 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 LRRC58Q96CX6 371 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 NMD3Q96D46 503 aaKnown RBP13.13□□□□□ -0.31
SEC13-213ENST00000445064 MARS2Q96GW9 593 aaKnown RBP13.13□□□□□ -0.31
SEC13-213ENST00000445064 SH3GL1Q99961 368 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 TMPRSS13Q9BYE2 586 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 SAP30LQ9HAJ7 183 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 MED31Q9Y3C7 131 aa13.13□□□□□ -0.31
SEC13-213ENST00000445064 HMGB1P1B2RPK0 211 aaPredicted RBP13.12□□□□□ -0.31
SEC13-213ENST00000445064 CLDN25C9JDP6 229 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 PIP5K1CO60331 668 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 IGF2P01344 180 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 IGHV1-46P01743 117 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 IGHV2-5P01817 119 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 EPHA1P21709 976 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 MMP15P51511 669 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 SCGB2A2Q13296 93 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 TOP3AQ13472 1001 aaPredicted RBP13.12□□□□□ -0.31
SEC13-213ENST00000445064 ZNF771Q7L3S4 317 aaPredicted RBP13.12□□□□□ -0.31
SEC13-213ENST00000445064 PEG10Q86TG7 708 aaKnown RBP13.12□□□□□ -0.31
SEC13-213ENST00000445064 CLDN22Q8N7P3 220 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 SLC25A40Q8TBP6 338 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 C10orf82Q8WW14 230 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 IPCEF1Q8WWN9 437 aaPredicted RBP13.12□□□□□ -0.31
SEC13-213ENST00000445064 RAB1CQ92928 201 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms