RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 CCNB1IP1Q9NPC3 277 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 KIF17Q9P2E2 1029 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 HEATR1Q9H583 2144 aaKnown RBP9.44□□□□□ -0.9
HDAC6-211ENST00000443563 POLQO75417 2590 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 ALPK2Q86TB3 2170 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 A0A1W2PPL8 197 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 VSTM5A8MXK1 200 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 SHISA9B4DS77 424 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 H7C1C5 153 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 KHDRBS3O75525 346 aaKnown RBP9.43□□□□□ -0.9
HDAC6-211ENST00000443563 ATE1O95260 518 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 HLA-HP01893 362 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 CST2P09228 141 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 CECR9P0C854 216 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 PTDSS1P48651 473 aaKnown RBP9.43□□□□□ -0.9
HDAC6-211ENST00000443563 IDH3GP51553 393 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-211ENST00000443563 IST1P53990 364 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 ACTR3P61158 418 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 LCN6P62502 163 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 PLP2Q04941 152 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 PIGFQ07326 219 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 NPRL3Q12980 569 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 SGCAQ16586 387 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 CLEC12AQ5QGZ9 265 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 FAM27BQ5VT28 67 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 LEG1Q6P5S2 330 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 FOXL2NBQ6ZUU3 175 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 TMEM179BQ7Z7N9 219 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 GLB1L2Q8IW92 636 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 ATG16L2Q8NAA4 619 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 OR4F15Q8NGB8 312 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 OR5K1Q8NHB7 308 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 TEX47Q8TBZ9 253 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 TMEM171Q8WVE6 324 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 MBD6Q96DN6 1003 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 CCL19Q99731 98 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 SH3GL3Q99963 347 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 NIPSNAP1Q9BPW8 284 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 TSSK6Q9BXA6 273 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 LIME1Q9H400 295 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 BEX4Q9NWD9 120 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-211ENST00000443563 CISD1Q9NZ45 108 aaKnown RBP9.43□□□□□ -0.9
HDAC6-211ENST00000443563 KLHL21Q9UJP4 597 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 SPEF1Q9Y4P9 236 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 UGT2A1Q9Y4X1 527 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 ATP23Q9Y6H3 246 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 NOTCH2Q04721 2471 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 NAV2Q8IVL1 2488 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 ABCA4P78363 2273 aa9.43□□□□□ -0.9
HDAC6-211ENST00000443563 CELSR1Q9NYQ6 3014 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 IGKV1D-43A0A0B4J1Z2 117 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 IQCMA0A1B0GVH7 501 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 C12orf71A8MTZ7 269 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 G3V2T6 193 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 H3BN98 237 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 BHLHE40O14503 412 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 SLC16A7O60669 478 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 IFNGP01579 166 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 SERPINA5P05154 406 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 HIST1H1CP16403 213 aaKnown RBP9.42□□□□□ -0.9
HDAC6-211ENST00000443563 ZNF14P17017 642 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-211ENST00000443563 CD53P19397 219 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 MSR1P21757 451 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 LAP3P28838 519 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 CDAP32320 146 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 CDKN2AP42771 156 aaKnown RBP9.42□□□□□ -0.9
HDAC6-211ENST00000443563 GIPRP48546 466 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 NAAAQ02083 359 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.42□□□□□ -0.9
HDAC6-211ENST00000443563 KPNB1Q14974 876 aaKnown RBP9.42□□□□□ -0.9
HDAC6-211ENST00000443563 ZNF544Q6NX49 715 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 PTCHD4Q6ZW05 846 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 SYT9Q86SS6 491 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 ZDHHC13Q8IUH4 622 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 ALDH16A1Q8IZ83 802 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 FBXL14Q8N1E6 418 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 SVOPLQ8N434 492 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 LNX2Q8N448 690 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 LRRC18Q8N456 261 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 OR1J2Q8NGS2 313 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 LILRB1Q8NHL6 650 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-211ENST00000443563 SMAP2Q8WU79 429 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-211ENST00000443563 NRGNQ92686 78 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 NABP1Q96AH0 204 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 DHRS9Q9BPW9 319 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 TEX12Q9BXU0 123 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 SYT4Q9H2B2 425 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 CXorf56Q9H5V9 222 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 RERGLQ9H628 205 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 NTN4Q9HB63 628 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 ZNF224Q9NZL3 707 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 MOKQ9UQ07 419 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 PLEKHA6Q9Y2H5 1048 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 VPS13CQ709C8 3753 aa9.42□□□□□ -0.9
HDAC6-211ENST00000443563 PRR14LQ5THK1 2151 aa9.41□□□□□ -0.9
HDAC6-211ENST00000443563 ZNF503-AS2A6NEH8 195 aa9.41□□□□□ -0.9
HDAC6-211ENST00000443563 ATP6V1G2-DDX39BF2Z307 99 aa9.41□□□□□ -0.9
HDAC6-211ENST00000443563 SOX14O95416 240 aa9.41□□□□□ -0.9
HDAC6-211ENST00000443563 BMP4P12644 408 aa9.41□□□□□ -0.9
HDAC6-211ENST00000443563 OSMP13725 252 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms